Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
HIST1H3AP68431 AL928921.2-201ENST00000641325 2442 ntBASIC12.84□□□□□ -0.35
HIST1H3AP68431 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
HIST1H3AP68431 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC12.84□□□□□ -0.35
HIST1H3AP68431 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
HIST1H3AP68431 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC12.84□□□□□ -0.35
HIST1H3AP68431 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
HIST1H3AP68431 PTENP1-202ENST00000532280 3996 ntBASIC12.84□□□□□ -0.35
HIST1H3AP68431 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
HIST1H3AP68431 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC12.84□□□□□ -0.35
HIST1H3AP68431 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
HIST1H3AP68431 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
HIST1H3AP68431 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
HIST1H3AP68431 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
HIST1H3AP68431 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
HIST1H3AP68431 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
HIST1H3AP68431 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
HIST1H3AP68431 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
HIST1H3AP68431 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC12.84□□□□□ -0.35
HIST1H3AP68431 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
HIST1H3AP68431 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
HIST1H3AP68431 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC12.84□□□□□ -0.35
HIST1H3AP68431 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
HIST1H3AP68431 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
HIST1H3AP68431 MPV17-206ENST00000402722 827 ntTSL 3 BASIC12.84□□□□□ -0.35
HIST1H3AP68431 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC12.84□□□□□ -0.35
HIST1H3AP68431 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC12.84□□□□□ -0.35
HIST1H3AP68431 USB1-202ENST00000423271 1217 ntTSL 2 BASIC12.84□□□□□ -0.35
HIST1H3AP68431 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC12.84□□□□□ -0.35
HIST1H3AP68431 AL355994.2-201ENST00000447882 704 ntBASIC12.84□□□□□ -0.35
HIST1H3AP68431 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
HIST1H3AP68431 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC12.84□□□□□ -0.35
HIST1H3AP68431 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC12.84□□□□□ -0.35
HIST1H3AP68431 ORC6-206ENST00000568364 888 ntTSL 5 BASIC12.84□□□□□ -0.35
HIST1H3AP68431 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC12.84□□□□□ -0.35
HIST1H3AP68431 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC12.84□□□□□ -0.35
HIST1H3AP68431 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC12.84□□□□□ -0.35
HIST1H3AP68431 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
HIST1H3AP68431 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC12.84□□□□□ -0.35
HIST1H3AP68431 LINC02084-201ENST00000606069 1096 ntBASIC12.84□□□□□ -0.35
HIST1H3AP68431 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC12.84□□□□□ -0.35
HIST1H3AP68431 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
HIST1H3AP68431 AC027601.3-201ENST00000622907 509 ntBASIC12.84□□□□□ -0.35
HIST1H3AP68431 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC12.84□□□□□ -0.35
HIST1H3AP68431 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC12.84□□□□□ -0.35
HIST1H3AP68431 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
HIST1H3AP68431 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC12.84□□□□□ -0.35
HIST1H3AP68431 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
HIST1H3AP68431 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
HIST1H3AP68431 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
HIST1H3AP68431 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
HIST1H3AP68431 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
HIST1H3AP68431 AC064801.2-201ENST00000625052 1303 ntBASIC12.84□□□□□ -0.35
HIST1H3AP68431 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC12.84□□□□□ -0.35
HIST1H3AP68431 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
HIST1H3AP68431 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
HIST1H3AP68431 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC12.84□□□□□ -0.35
HIST1H3AP68431 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
HIST1H3AP68431 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
HIST1H3AP68431 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC12.83□□□□□ -0.35
HIST1H3AP68431 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
HIST1H3AP68431 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC12.83□□□□□ -0.35
HIST1H3AP68431 ABR-228ENST00000574437 3196 ntTSL 5 BASIC12.83□□□□□ -0.35
HIST1H3AP68431 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
HIST1H3AP68431 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
HIST1H3AP68431 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.35
HIST1H3AP68431 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
HIST1H3AP68431 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
HIST1H3AP68431 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC12.83□□□□□ -0.35
HIST1H3AP68431 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
HIST1H3AP68431 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
HIST1H3AP68431 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
HIST1H3AP68431 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
HIST1H3AP68431 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
HIST1H3AP68431 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
HIST1H3AP68431 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC12.83□□□□□ -0.36
HIST1H3AP68431 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
HIST1H3AP68431 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
HIST1H3AP68431 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
HIST1H3AP68431 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC12.83□□□□□ -0.36
HIST1H3AP68431 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC12.83□□□□□ -0.36
HIST1H3AP68431 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
HIST1H3AP68431 EDF1-203ENST00000371649 790 ntTSL 2 BASIC12.83□□□□□ -0.36
HIST1H3AP68431 MXI1-205ENST00000393134 889 ntTSL 2 BASIC12.83□□□□□ -0.36
HIST1H3AP68431 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC12.83□□□□□ -0.36
HIST1H3AP68431 BOLA2P3-201ENST00000404566 256 ntBASIC12.83□□□□□ -0.36
HIST1H3AP68431 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC12.83□□□□□ -0.36
HIST1H3AP68431 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
HIST1H3AP68431 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC12.83□□□□□ -0.36
HIST1H3AP68431 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
HIST1H3AP68431 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC12.83□□□□□ -0.36
HIST1H3AP68431 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC12.83□□□□□ -0.36
HIST1H3AP68431 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC12.83□□□□□ -0.36
HIST1H3AP68431 CNN2P10-201ENST00000443067 918 ntBASIC12.83□□□□□ -0.36
HIST1H3AP68431 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC12.83□□□□□ -0.36
HIST1H3AP68431 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
HIST1H3AP68431 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC12.83□□□□□ -0.36
HIST1H3AP68431 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
HIST1H3AP68431 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
HIST1H3AP68431 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC12.83□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms