Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SPCS3P61009 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC12.06□□□□□ -0.48
SPCS3P61009 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SPCS3P61009 DRD5P1-201ENST00000456605 1438 ntBASIC12.06□□□□□ -0.48
SPCS3P61009 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SPCS3P61009 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC12.06□□□□□ -0.48
SPCS3P61009 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC12.06□□□□□ -0.48
SPCS3P61009 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SPCS3P61009 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SPCS3P61009 AL139400.1-201ENST00000366220 510 ntBASIC12.06□□□□□ -0.48
SPCS3P61009 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SPCS3P61009 BX842568.4-201ENST00000421222 227 ntBASIC12.06□□□□□ -0.48
SPCS3P61009 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SPCS3P61009 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SPCS3P61009 GLI4-203ENST00000517468 963 ntTSL 5 BASIC12.06□□□□□ -0.48
SPCS3P61009 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SPCS3P61009 MPI-209ENST00000564003 1195 ntTSL 2 BASIC12.06□□□□□ -0.48
SPCS3P61009 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
SPCS3P61009 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC12.06□□□□□ -0.48
SPCS3P61009 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
SPCS3P61009 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SPCS3P61009 AC016397.2-201ENST00000624848 1985 ntBASIC12.06□□□□□ -0.48
SPCS3P61009 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC12.06□□□□□ -0.48
SPCS3P61009 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC12.06□□□□□ -0.48
SPCS3P61009 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SPCS3P61009 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
SPCS3P61009 USP3-204ENST00000540797 5474 ntTSL 2 BASIC12.06□□□□□ -0.48
SPCS3P61009 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
SPCS3P61009 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
SPCS3P61009 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC12.06□□□□□ -0.48
SPCS3P61009 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC12.06□□□□□ -0.48
SPCS3P61009 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SPCS3P61009 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
SPCS3P61009 KRT78-202ENST00000359499 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
SPCS3P61009 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SPCS3P61009 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SPCS3P61009 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SPCS3P61009 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
SPCS3P61009 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
SPCS3P61009 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC12.06□□□□□ -0.48
SPCS3P61009 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SPCS3P61009 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC12.06□□□□□ -0.48
SPCS3P61009 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
SPCS3P61009 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SPCS3P61009 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC12.05□□□□□ -0.48
SPCS3P61009 KCNN1-201ENST00000222249 3625 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
SPCS3P61009 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SPCS3P61009 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SPCS3P61009 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SPCS3P61009 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
SPCS3P61009 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SPCS3P61009 ACSM2B-201ENST00000329697 2935 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SPCS3P61009 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC12.05□□□□□ -0.48
SPCS3P61009 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
SPCS3P61009 AC090505.1-201ENST00000430515 1834 ntBASIC12.05□□□□□ -0.48
SPCS3P61009 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
SPCS3P61009 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SPCS3P61009 SLC25A25-203ENST00000373068 3431 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SPCS3P61009 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SPCS3P61009 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC12.05□□□□□ -0.48
SPCS3P61009 BAD-202ENST00000394531 631 ntTSL 3 BASIC12.05□□□□□ -0.48
SPCS3P61009 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC12.05□□□□□ -0.48
SPCS3P61009 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC12.05□□□□□ -0.48
SPCS3P61009 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC12.05□□□□□ -0.48
SPCS3P61009 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SPCS3P61009 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC12.05□□□□□ -0.48
SPCS3P61009 KLF2P3-201ENST00000451977 1087 ntBASIC12.05□□□□□ -0.48
SPCS3P61009 AC026410.3-201ENST00000514280 936 ntBASIC12.05□□□□□ -0.48
SPCS3P61009 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
SPCS3P61009 DHDH-204ENST00000523250 634 ntTSL 5 BASIC12.05□□□□□ -0.48
SPCS3P61009 RAB35-202ENST00000534951 939 ntTSL 2 BASIC12.05□□□□□ -0.48
SPCS3P61009 BAD-207ENST00000544785 525 ntTSL 3 BASIC12.05□□□□□ -0.48
SPCS3P61009 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC12.05□□□□□ -0.48
SPCS3P61009 SNHG9-202ENST00000564014 471 ntBASIC12.05□□□□□ -0.48
SPCS3P61009 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC12.05□□□□□ -0.48
SPCS3P61009 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC12.05□□□□□ -0.48
SPCS3P61009 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
SPCS3P61009 AL844908.2-201ENST00000609461 460 ntBASIC12.05□□□□□ -0.48
SPCS3P61009 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC12.05□□□□□ -0.48
SPCS3P61009 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC12.05□□□□□ -0.48
SPCS3P61009 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC12.05□□□□□ -0.48
SPCS3P61009 INE2-201ENST00000630399 1874 ntBASIC12.05□□□□□ -0.48
SPCS3P61009 AC016738.1-201ENST00000452364 3485 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SPCS3P61009 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
SPCS3P61009 AC019294.4-201ENST00000561777 2905 ntBASIC12.05□□□□□ -0.48
SPCS3P61009 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC12.05□□□□□ -0.48
SPCS3P61009 RIOK3-203ENST00000577501 1904 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SPCS3P61009 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
SPCS3P61009 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
SPCS3P61009 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
SPCS3P61009 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC12.05□□□□□ -0.48
SPCS3P61009 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SPCS3P61009 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
SPCS3P61009 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SPCS3P61009 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SPCS3P61009 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC12.04□□□□□ -0.48
SPCS3P61009 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC12.04□□□□□ -0.48
SPCS3P61009 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC12.04□□□□□ -0.48
SPCS3P61009 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC12.04□□□□□ -0.48
SPCS3P61009 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC12.04□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms