Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLDN6P56747 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CLDN6P56747 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CLDN6P56747 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLDN6P56747 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC14.06□□□□□ -0.16
CLDN6P56747 KRT18P36-201ENST00000411618 1276 ntBASIC14.06□□□□□ -0.16
CLDN6P56747 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC14.06□□□□□ -0.16
CLDN6P56747 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CLDN6P56747 LINC01433-201ENST00000419003 697 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CLDN6P56747 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLDN6P56747 TSPY25P-201ENST00000429463 745 ntBASIC14.06□□□□□ -0.16
CLDN6P56747 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC14.06□□□□□ -0.16
CLDN6P56747 CHCHD2P9-201ENST00000461726 456 ntBASIC14.06□□□□□ -0.16
CLDN6P56747 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CLDN6P56747 DNAJB13-203ENST00000537753 912 ntTSL 3 BASIC14.06□□□□□ -0.16
CLDN6P56747 CR383656.3-201ENST00000551315 183 ntBASIC14.06□□□□□ -0.16
CLDN6P56747 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
CLDN6P56747 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC14.06□□□□□ -0.16
CLDN6P56747 AC087392.5-201ENST00000612517 489 ntBASIC14.06□□□□□ -0.16
CLDN6P56747 AC105137.3-201ENST00000617588 984 ntBASIC14.06□□□□□ -0.16
CLDN6P56747 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC14.06□□□□□ -0.16
CLDN6P56747 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC14.06□□□□□ -0.16
CLDN6P56747 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC14.06□□□□□ -0.16
CLDN6P56747 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC14.06□□□□□ -0.16
CLDN6P56747 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLDN6P56747 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLDN6P56747 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLDN6P56747 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
CLDN6P56747 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLDN6P56747 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC14.06□□□□□ -0.16
CLDN6P56747 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLDN6P56747 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLDN6P56747 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLDN6P56747 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
CLDN6P56747 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLDN6P56747 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
CLDN6P56747 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLDN6P56747 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC14.06□□□□□ -0.16
CLDN6P56747 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
CLDN6P56747 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC14.06□□□□□ -0.16
CLDN6P56747 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC14.06□□□□□ -0.16
CLDN6P56747 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLDN6P56747 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC14.05□□□□□ -0.16
CLDN6P56747 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLDN6P56747 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC14.05□□□□□ -0.16
CLDN6P56747 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
CLDN6P56747 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLDN6P56747 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLDN6P56747 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLDN6P56747 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLDN6P56747 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CLDN6P56747 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
CLDN6P56747 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CLDN6P56747 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC14.05□□□□□ -0.16
CLDN6P56747 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLDN6P56747 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
CLDN6P56747 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC14.05□□□□□ -0.16
CLDN6P56747 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
CLDN6P56747 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLDN6P56747 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC14.05□□□□□ -0.16
CLDN6P56747 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLDN6P56747 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC14.05□□□□□ -0.16
CLDN6P56747 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CLDN6P56747 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CLDN6P56747 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC14.05□□□□□ -0.16
CLDN6P56747 MAGOH-202ENST00000371470 756 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLDN6P56747 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLDN6P56747 Z97652.1-201ENST00000415176 329 ntTSL 5 BASIC14.05□□□□□ -0.16
CLDN6P56747 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CLDN6P56747 TCERG1L-AS1-201ENST00000436942 472 ntTSL 2 BASIC14.05□□□□□ -0.16
CLDN6P56747 IZUMO1R-202ENST00000440961 805 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
CLDN6P56747 DUTP3-201ENST00000450025 415 ntBASIC14.05□□□□□ -0.16
CLDN6P56747 AL138731.1-201ENST00000452624 739 ntTSL 3 BASIC14.05□□□□□ -0.16
CLDN6P56747 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC14.05□□□□□ -0.16
CLDN6P56747 FRMD4A-208ENST00000493380 1149 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CLDN6P56747 REEP5-205ENST00000504247 480 ntTSL 5 BASIC14.05□□□□□ -0.16
CLDN6P56747 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC14.05□□□□□ -0.16
CLDN6P56747 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CLDN6P56747 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
CLDN6P56747 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC14.05□□□□□ -0.16
CLDN6P56747 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC14.05□□□□□ -0.16
CLDN6P56747 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC14.05□□□□□ -0.16
CLDN6P56747 MT3-203ENST00000565838 421 ntTSL 3 BASIC14.05□□□□□ -0.16
CLDN6P56747 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CLDN6P56747 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
CLDN6P56747 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC14.05□□□□□ -0.16
CLDN6P56747 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLDN6P56747 AC138466.4-201ENST00000623965 852 ntBASIC14.05□□□□□ -0.16
CLDN6P56747 CMC2-224ENST00000630396 481 ntTSL 5 BASIC14.05□□□□□ -0.16
CLDN6P56747 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC14.05□□□□□ -0.16
CLDN6P56747 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC14.05□□□□□ -0.16
CLDN6P56747 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLDN6P56747 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLDN6P56747 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CLDN6P56747 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC14.05□□□□□ -0.16
CLDN6P56747 LINC02537-201ENST00000635943 1367 ntTSL 4 BASIC14.05□□□□□ -0.16
CLDN6P56747 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CLDN6P56747 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC14.05□□□□□ -0.16
CLDN6P56747 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC14.05□□□□□ -0.16
CLDN6P56747 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms