Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CDH13P55290 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC14.42□□□□□ -0.1
CDH13P55290 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC14.42□□□□□ -0.1
CDH13P55290 FAM207CP-201ENST00000443486 507 ntBASIC14.42□□□□□ -0.1
CDH13P55290 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CDH13P55290 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
CDH13P55290 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CDH13P55290 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC14.42□□□□□ -0.1
CDH13P55290 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC14.42□□□□□ -0.1
CDH13P55290 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
CDH13P55290 AC145423.3-201ENST00000615987 467 ntBASIC14.42□□□□□ -0.1
CDH13P55290 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
CDH13P55290 ABBA01031660.1-201ENST00000635219 756 ntBASIC14.42□□□□□ -0.1
CDH13P55290 AL033527.5-201ENST00000641382 801 ntBASIC14.42□□□□□ -0.1
CDH13P55290 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
CDH13P55290 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CDH13P55290 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
CDH13P55290 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
CDH13P55290 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
CDH13P55290 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CDH13P55290 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CDH13P55290 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
CDH13P55290 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CDH13P55290 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CDH13P55290 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
CDH13P55290 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CDH13P55290 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CDH13P55290 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CDH13P55290 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CDH13P55290 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CDH13P55290 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC14.42□□□□□ -0.1
CDH13P55290 AC131212.3-201ENST00000624087 4219 ntBASIC14.42□□□□□ -0.1
CDH13P55290 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
CDH13P55290 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC14.42□□□□□ -0.1
CDH13P55290 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
CDH13P55290 MAPT-IT1-201ENST00000624111 3016 ntBASIC14.41□□□□□ -0.1
CDH13P55290 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
CDH13P55290 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CDH13P55290 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC14.41□□□□□ -0.1
CDH13P55290 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CDH13P55290 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
CDH13P55290 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CDH13P55290 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
CDH13P55290 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC14.41□□□□□ -0.1
CDH13P55290 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
CDH13P55290 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
CDH13P55290 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC14.41□□□□□ -0.1
CDH13P55290 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
CDH13P55290 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CDH13P55290 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CDH13P55290 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC14.41□□□□□ -0.1
CDH13P55290 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
CDH13P55290 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CDH13P55290 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CDH13P55290 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC14.41□□□□□ -0.1
CDH13P55290 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
CDH13P55290 GOLGA6L11P-201ENST00000417252 1298 ntBASIC14.41□□□□□ -0.1
CDH13P55290 POM121L8P-201ENST00000417732 1281 ntBASIC14.41□□□□□ -0.1
CDH13P55290 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC14.41□□□□□ -0.1
CDH13P55290 AC245100.3-201ENST00000441281 285 ntBASIC14.41□□□□□ -0.1
CDH13P55290 POM121L9P-203ENST00000441984 1285 ntBASIC14.41□□□□□ -0.1
CDH13P55290 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC14.41□□□□□ -0.1
CDH13P55290 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
CDH13P55290 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC14.41□□□□□ -0.1
CDH13P55290 AC009486.1-201ENST00000569860 813 ntBASIC14.41□□□□□ -0.1
CDH13P55290 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC14.41□□□□□ -0.1
CDH13P55290 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC14.41□□□□□ -0.1
CDH13P55290 AC138696.2-201ENST00000607376 223 ntBASIC14.41□□□□□ -0.1
CDH13P55290 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
CDH13P55290 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC14.41□□□□□ -0.1
CDH13P55290 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CDH13P55290 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CDH13P55290 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CDH13P55290 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
CDH13P55290 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
CDH13P55290 AC130686.1-201ENST00000622936 2466 ntBASIC14.41□□□□□ -0.1
CDH13P55290 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC14.41□□□□□ -0.1
CDH13P55290 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CDH13P55290 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC14.41□□□□□ -0.1
CDH13P55290 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CDH13P55290 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CDH13P55290 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CDH13P55290 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC14.41□□□□□ -0.1
CDH13P55290 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CDH13P55290 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC14.41□□□□□ -0.1
CDH13P55290 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CDH13P55290 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC14.41□□□□□ -0.1
CDH13P55290 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
CDH13P55290 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDH13P55290 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDH13P55290 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
CDH13P55290 KRT8P24-201ENST00000560290 1559 ntBASIC14.4□□□□□ -0.1
CDH13P55290 LSS-211ENST00000522411 2523 ntTSL 2 BASIC14.4□□□□□ -0.1
CDH13P55290 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC14.4□□□□□ -0.1
CDH13P55290 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDH13P55290 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDH13P55290 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDH13P55290 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDH13P55290 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
CDH13P55290 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms