Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 GMIP-201ENST00000203556 3538 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NR1H2P55055 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
NR1H2P55055 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
NR1H2P55055 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NR1H2P55055 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC14.04□□□□□ -0.16
NR1H2P55055 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
NR1H2P55055 AC007787.1-201ENST00000588095 1583 ntBASIC14.04□□□□□ -0.16
NR1H2P55055 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NR1H2P55055 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
NR1H2P55055 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
NR1H2P55055 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
NR1H2P55055 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC14.03□□□□□ -0.16
NR1H2P55055 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NR1H2P55055 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
NR1H2P55055 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC14.03□□□□□ -0.16
NR1H2P55055 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
NR1H2P55055 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
NR1H2P55055 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC14.03□□□□□ -0.16
NR1H2P55055 AC004899.2-201ENST00000622993 3860 ntBASIC14.03□□□□□ -0.16
NR1H2P55055 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NR1H2P55055 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NR1H2P55055 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NR1H2P55055 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NR1H2P55055 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NR1H2P55055 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC14.03□□□□□ -0.16
NR1H2P55055 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NR1H2P55055 PCDHB18P-202ENST00000526308 3197 ntBASIC14.03□□□□□ -0.16
NR1H2P55055 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC14.03□□□□□ -0.16
NR1H2P55055 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NR1H2P55055 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NR1H2P55055 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
NR1H2P55055 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC14.03□□□□□ -0.16
NR1H2P55055 AC004987.2-201ENST00000395959 1148 ntBASIC14.03□□□□□ -0.16
NR1H2P55055 RN7SL692P-201ENST00000464677 288 ntBASIC14.03□□□□□ -0.16
NR1H2P55055 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC14.03□□□□□ -0.16
NR1H2P55055 MEIS3P1-201ENST00000495167 958 ntBASIC14.03□□□□□ -0.16
NR1H2P55055 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC14.03□□□□□ -0.16
NR1H2P55055 CDK4-206ENST00000549606 558 ntTSL 2 BASIC14.03□□□□□ -0.16
NR1H2P55055 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC14.03□□□□□ -0.16
NR1H2P55055 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC14.03□□□□□ -0.16
NR1H2P55055 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
NR1H2P55055 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC14.03□□□□□ -0.16
NR1H2P55055 AL132655.2-201ENST00000596276 594 ntBASIC14.03□□□□□ -0.16
NR1H2P55055 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
NR1H2P55055 MIR6069-201ENST00000620069 79 ntBASIC14.03□□□□□ -0.16
NR1H2P55055 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC14.03□□□□□ -0.16
NR1H2P55055 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC14.03□□□□□ -0.16
NR1H2P55055 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
NR1H2P55055 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
NR1H2P55055 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC14.03□□□□□ -0.16
NR1H2P55055 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
NR1H2P55055 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
NR1H2P55055 AC012508.2-201ENST00000567613 1472 ntBASIC14.03□□□□□ -0.16
NR1H2P55055 AC007541.1-201ENST00000570282 1469 ntBASIC14.03□□□□□ -0.16
NR1H2P55055 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC14.03□□□□□ -0.16
NR1H2P55055 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC14.03□□□□□ -0.16
NR1H2P55055 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
NR1H2P55055 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
NR1H2P55055 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC14.03□□□□□ -0.16
NR1H2P55055 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
NR1H2P55055 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC14.03□□□□□ -0.16
NR1H2P55055 ACIN1-202ENST00000338631 2445 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
NR1H2P55055 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
NR1H2P55055 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NR1H2P55055 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
NR1H2P55055 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
NR1H2P55055 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
NR1H2P55055 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
NR1H2P55055 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
NR1H2P55055 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
NR1H2P55055 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
NR1H2P55055 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC14.02□□□□□ -0.16
NR1H2P55055 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
NR1H2P55055 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
NR1H2P55055 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
NR1H2P55055 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
NR1H2P55055 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
NR1H2P55055 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
NR1H2P55055 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
NR1H2P55055 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC14.02□□□□□ -0.16
NR1H2P55055 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC14.02□□□□□ -0.16
NR1H2P55055 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
NR1H2P55055 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NR1H2P55055 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NR1H2P55055 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC14.02□□□□□ -0.17
NR1H2P55055 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NR1H2P55055 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
NR1H2P55055 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
NR1H2P55055 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC14.02□□□□□ -0.17
NR1H2P55055 SPDYE17-201ENST00000412399 783 ntBASIC14.02□□□□□ -0.17
NR1H2P55055 DFFBP1-201ENST00000433250 979 ntBASIC14.02□□□□□ -0.17
NR1H2P55055 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC14.02□□□□□ -0.17
NR1H2P55055 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC14.02□□□□□ -0.17
NR1H2P55055 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC14.02□□□□□ -0.17
NR1H2P55055 KRT17P7-201ENST00000451704 1104 ntBASIC14.02□□□□□ -0.17
NR1H2P55055 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NR1H2P55055 AC093004.1-201ENST00000508850 424 ntBASIC14.02□□□□□ -0.17
NR1H2P55055 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
NR1H2P55055 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC14.02□□□□□ -0.17
NR1H2P55055 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms