Protein–RNA interactions for Protein: P50458

LHX2, LIM/homeobox protein Lhx2, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX2P50458 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LHX2P50458 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LHX2P50458 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LHX2P50458 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC13.06□□□□□ -0.32
LHX2P50458 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
LHX2P50458 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
LHX2P50458 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC13.06□□□□□ -0.32
LHX2P50458 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LHX2P50458 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
LHX2P50458 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
LHX2P50458 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC13.05□□□□□ -0.32
LHX2P50458 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
LHX2P50458 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC13.05□□□□□ -0.32
LHX2P50458 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC13.05□□□□□ -0.32
LHX2P50458 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
LHX2P50458 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
LHX2P50458 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
LHX2P50458 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
LHX2P50458 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
LHX2P50458 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
LHX2P50458 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
LHX2P50458 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
LHX2P50458 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
LHX2P50458 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
LHX2P50458 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC13.05□□□□□ -0.32
LHX2P50458 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
LHX2P50458 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
LHX2P50458 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
LHX2P50458 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC13.05□□□□□ -0.32
LHX2P50458 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
LHX2P50458 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
LHX2P50458 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
LHX2P50458 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
LHX2P50458 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
LHX2P50458 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
LHX2P50458 ISCA2P1-201ENST00000425548 448 ntBASIC13.05□□□□□ -0.32
LHX2P50458 MSRA-203ENST00000441698 788 ntTSL 2 BASIC13.05□□□□□ -0.32
LHX2P50458 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC13.05□□□□□ -0.32
LHX2P50458 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC13.05□□□□□ -0.32
LHX2P50458 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC13.05□□□□□ -0.32
LHX2P50458 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC13.05□□□□□ -0.32
LHX2P50458 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC13.05□□□□□ -0.32
LHX2P50458 DRG2-220ENST00000583355 891 ntTSL 3 BASIC13.05□□□□□ -0.32
LHX2P50458 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC13.05□□□□□ -0.32
LHX2P50458 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC13.05□□□□□ -0.32
LHX2P50458 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC13.05□□□□□ -0.32
LHX2P50458 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
LHX2P50458 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
LHX2P50458 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
LHX2P50458 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
LHX2P50458 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC13.05□□□□□ -0.32
LHX2P50458 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC13.05□□□□□ -0.32
LHX2P50458 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
LHX2P50458 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
LHX2P50458 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC13.05□□□□□ -0.32
LHX2P50458 AL390755.1-201ENST00000623716 2027 ntBASIC13.05□□□□□ -0.32
LHX2P50458 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
LHX2P50458 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
LHX2P50458 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
LHX2P50458 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC13.04□□□□□ -0.32
LHX2P50458 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
LHX2P50458 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
LHX2P50458 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
LHX2P50458 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
LHX2P50458 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.32
LHX2P50458 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC13.04□□□□□ -0.32
LHX2P50458 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC13.04□□□□□ -0.32
LHX2P50458 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
LHX2P50458 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
LHX2P50458 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
LHX2P50458 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC13.04□□□□□ -0.32
LHX2P50458 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC13.04□□□□□ -0.32
LHX2P50458 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LHX2P50458 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LHX2P50458 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC13.04□□□□□ -0.32
LHX2P50458 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LHX2P50458 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC13.04□□□□□ -0.32
LHX2P50458 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC13.04□□□□□ -0.32
LHX2P50458 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LHX2P50458 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LHX2P50458 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC13.04□□□□□ -0.32
LHX2P50458 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
LHX2P50458 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
LHX2P50458 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC13.04□□□□□ -0.32
LHX2P50458 AC239868.1-201ENST00000369385 493 ntBASIC13.04□□□□□ -0.32
LHX2P50458 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
LHX2P50458 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LHX2P50458 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC13.04□□□□□ -0.32
LHX2P50458 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC13.04□□□□□ -0.32
LHX2P50458 AC006335.1-201ENST00000445200 547 ntBASIC13.04□□□□□ -0.32
LHX2P50458 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC13.04□□□□□ -0.32
LHX2P50458 AC012618.1-201ENST00000461223 412 ntBASIC13.04□□□□□ -0.32
LHX2P50458 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC13.04□□□□□ -0.32
LHX2P50458 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
LHX2P50458 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC13.04□□□□□ -0.32
LHX2P50458 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC13.04□□□□□ -0.32
LHX2P50458 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC13.04□□□□□ -0.32
LHX2P50458 CHMP4BP1-201ENST00000556017 588 ntBASIC13.04□□□□□ -0.32
LHX2P50458 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
LHX2P50458 AC005586.2-201ENST00000563946 837 ntBASIC13.04□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms