Protein–RNA interactions for Protein: P45973

CBX5, Chromobox protein homolog 5, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5P45973 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
CBX5P45973 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
CBX5P45973 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CBX5P45973 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
CBX5P45973 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC12.76□□□□□ -0.37
CBX5P45973 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
CBX5P45973 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CBX5P45973 ST8SIA1-203ENST00000396037 9714 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CBX5P45973 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC12.76□□□□□ -0.37
CBX5P45973 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
CBX5P45973 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CBX5P45973 TP53TG5-201ENST00000372726 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CBX5P45973 MYNN-201ENST00000349841 4999 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CBX5P45973 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CBX5P45973 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
CBX5P45973 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC12.76□□□□□ -0.37
CBX5P45973 EPM2AIP1-201ENST00000322716 8126 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
CBX5P45973 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC12.75□□□□□ -0.37
CBX5P45973 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CBX5P45973 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CBX5P45973 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC12.75□□□□□ -0.37
CBX5P45973 LINC02188-202ENST00000569740 3775 ntTSL 4 BASIC12.75□□□□□ -0.37
CBX5P45973 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CBX5P45973 ABR-202ENST00000302538 5289 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CBX5P45973 MYT1-201ENST00000328439 5535 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
CBX5P45973 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CBX5P45973 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CBX5P45973 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CBX5P45973 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC12.75□□□□□ -0.37
CBX5P45973 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
CBX5P45973 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CBX5P45973 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
CBX5P45973 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CBX5P45973 KCNIP2-203ENST00000348850 2089 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CBX5P45973 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CBX5P45973 PREX1-201ENST00000371941 6636 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CBX5P45973 SNX12-202ENST00000374274 2376 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
CBX5P45973 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC12.75□□□□□ -0.37
CBX5P45973 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CBX5P45973 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CBX5P45973 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
CBX5P45973 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
CBX5P45973 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CBX5P45973 CACNA1G-207ENST00000429973 7120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
CBX5P45973 AC090505.1-201ENST00000430515 1834 ntBASIC12.75□□□□□ -0.37
CBX5P45973 HTR5BP-201ENST00000430851 1154 ntBASIC12.75□□□□□ -0.37
CBX5P45973 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC12.75□□□□□ -0.37
CBX5P45973 RBPMS2P1-201ENST00000437762 623 ntBASIC12.75□□□□□ -0.37
CBX5P45973 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC12.75□□□□□ -0.37
CBX5P45973 CACNA1G-217ENST00000507336 7116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
CBX5P45973 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CBX5P45973 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CBX5P45973 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CBX5P45973 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
CBX5P45973 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC12.75□□□□□ -0.37
CBX5P45973 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CBX5P45973 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC12.75□□□□□ -0.37
CBX5P45973 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CBX5P45973 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC12.75□□□□□ -0.37
CBX5P45973 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC12.75□□□□□ -0.37
CBX5P45973 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC12.75□□□□□ -0.37
CBX5P45973 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
CBX5P45973 AC105339.1-204ENST00000636249 355 ntBASIC12.75□□□□□ -0.37
CBX5P45973 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC12.75□□□□□ -0.37
CBX5P45973 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CBX5P45973 SOGA3-207ENST00000481848 11464 ntAPPRIS P5 TSL 5 BASIC12.75□□□□□ -0.37
CBX5P45973 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC12.75□□□□□ -0.37
CBX5P45973 AL121827.1-201ENST00000370257 3264 ntTSL 2 BASIC12.75□□□□□ -0.37
CBX5P45973 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
CBX5P45973 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC12.75□□□□□ -0.37
CBX5P45973 LINC00869-206ENST00000610578 5734 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CBX5P45973 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC12.75□□□□□ -0.37
CBX5P45973 TRPV1-209ENST00000576351 2525 ntTSL 5 BASIC12.75□□□□□ -0.37
CBX5P45973 FNIP1-205ENST00000615660 6589 ntTSL 5 BASIC12.74□□□□□ -0.37
CBX5P45973 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CBX5P45973 RAB44-202ENST00000612677 4233 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
CBX5P45973 TMEM229B-207ENST00000557006 3941 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
CBX5P45973 GATAD2A-203ENST00000404158 5776 ntAPPRIS ALT1 TSL 2 BASIC12.74□□□□□ -0.37
CBX5P45973 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC12.74□□□□□ -0.37
CBX5P45973 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC12.74□□□□□ -0.37
CBX5P45973 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC12.74□□□□□ -0.37
CBX5P45973 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC12.74□□□□□ -0.37
CBX5P45973 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CBX5P45973 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC12.74□□□□□ -0.37
CBX5P45973 GRAMD4P3-201ENST00000621665 1669 ntBASIC12.74□□□□□ -0.37
CBX5P45973 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC12.74□□□□□ -0.37
CBX5P45973 PHYHIP-201ENST00000321613 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CBX5P45973 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CBX5P45973 AFF2-202ENST00000342251 7313 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CBX5P45973 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CBX5P45973 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC12.74□□□□□ -0.37
CBX5P45973 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC12.74□□□□□ -0.37
CBX5P45973 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC12.74□□□□□ -0.37
CBX5P45973 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC12.74□□□□□ -0.37
CBX5P45973 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CBX5P45973 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CBX5P45973 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CBX5P45973 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
CBX5P45973 AL645937.2-201ENST00000396808 931 ntBASIC12.74□□□□□ -0.37
CBX5P45973 SUN1-204ENST00000403868 978 ntTSL 2 BASIC12.74□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms