Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
NKX2-1P43699 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
NKX2-1P43699 MADD-203ENST00000349238 5873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
NKX2-1P43699 CEP126-201ENST00000263468 7039 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
NKX2-1P43699 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
NKX2-1P43699 PHLDB1-201ENST00000356063 5240 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
NKX2-1P43699 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC12.1□□□□□ -0.47
NKX2-1P43699 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC12.1□□□□□ -0.47
NKX2-1P43699 AC093525.8-201ENST00000624099 1342 ntBASIC12.1□□□□□ -0.47
NKX2-1P43699 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
NKX2-1P43699 CIPC-201ENST00000361786 4486 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
NKX2-1P43699 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
NKX2-1P43699 UNC13B-202ENST00000378496 5063 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
NKX2-1P43699 SPOUT1-201ENST00000361256 4286 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
NKX2-1P43699 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
NKX2-1P43699 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
NKX2-1P43699 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC12.09□□□□□ -0.47
NKX2-1P43699 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
NKX2-1P43699 AP000347.1-201ENST00000417194 5004 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
NKX2-1P43699 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
NKX2-1P43699 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
NKX2-1P43699 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
NKX2-1P43699 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
NKX2-1P43699 AC019294.4-201ENST00000561777 2905 ntBASIC12.09□□□□□ -0.47
NKX2-1P43699 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC12.09□□□□□ -0.47
NKX2-1P43699 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC12.09□□□□□ -0.47
NKX2-1P43699 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
NKX2-1P43699 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
NKX2-1P43699 FLNC-202ENST00000346177 9042 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
NKX2-1P43699 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
NKX2-1P43699 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
NKX2-1P43699 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
NKX2-1P43699 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
NKX2-1P43699 PKIG-203ENST00000372887 769 ntTSL 3 BASIC12.09□□□□□ -0.47
NKX2-1P43699 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
NKX2-1P43699 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
NKX2-1P43699 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC12.09□□□□□ -0.47
NKX2-1P43699 FAM58DP-201ENST00000428076 619 ntBASIC12.09□□□□□ -0.47
NKX2-1P43699 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC12.09□□□□□ -0.47
NKX2-1P43699 CEND1P1-201ENST00000451006 455 ntBASIC12.09□□□□□ -0.47
NKX2-1P43699 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
NKX2-1P43699 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC12.09□□□□□ -0.47
NKX2-1P43699 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
NKX2-1P43699 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
NKX2-1P43699 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC12.09□□□□□ -0.47
NKX2-1P43699 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC12.09□□□□□ -0.47
NKX2-1P43699 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC12.09□□□□□ -0.47
NKX2-1P43699 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
NKX2-1P43699 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
NKX2-1P43699 CCND1-203ENST00000536559 553 ntTSL 3 BASIC12.09□□□□□ -0.47
NKX2-1P43699 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC12.09□□□□□ -0.47
NKX2-1P43699 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC12.09□□□□□ -0.47
NKX2-1P43699 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC12.09□□□□□ -0.47
NKX2-1P43699 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC12.09□□□□□ -0.47
NKX2-1P43699 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC12.09□□□□□ -0.47
NKX2-1P43699 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC12.09□□□□□ -0.47
NKX2-1P43699 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC12.09□□□□□ -0.47
NKX2-1P43699 AC004461.2-201ENST00000629517 803 ntBASIC12.09□□□□□ -0.47
NKX2-1P43699 HFE2-206ENST00000634927 506 ntTSL 4 BASIC12.09□□□□□ -0.47
NKX2-1P43699 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC12.09□□□□□ -0.47
NKX2-1P43699 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
NKX2-1P43699 DHX37-201ENST00000308736 4550 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
NKX2-1P43699 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
NKX2-1P43699 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
NKX2-1P43699 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC12.09□□□□□ -0.47
NKX2-1P43699 YWHAZ-206ENST00000395957 5248 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
NKX2-1P43699 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
NKX2-1P43699 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
NKX2-1P43699 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
NKX2-1P43699 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
NKX2-1P43699 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
NKX2-1P43699 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC12.09□□□□□ -0.47
NKX2-1P43699 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
NKX2-1P43699 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC12.09□□□□□ -0.47
NKX2-1P43699 AC004241.5-201ENST00000623870 2448 ntBASIC12.09□□□□□ -0.47
NKX2-1P43699 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
NKX2-1P43699 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC12.09□□□□□ -0.47
NKX2-1P43699 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
NKX2-1P43699 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
NKX2-1P43699 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC12.09□□□□□ -0.47
NKX2-1P43699 PREX1-201ENST00000371941 6636 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
NKX2-1P43699 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
NKX2-1P43699 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
NKX2-1P43699 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
NKX2-1P43699 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
NKX2-1P43699 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
NKX2-1P43699 FAM193A-201ENST00000324666 4846 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
NKX2-1P43699 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
NKX2-1P43699 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
NKX2-1P43699 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC12.08□□□□□ -0.48
NKX2-1P43699 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC12.08□□□□□ -0.48
NKX2-1P43699 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
NKX2-1P43699 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
NKX2-1P43699 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
NKX2-1P43699 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC12.08□□□□□ -0.48
NKX2-1P43699 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
NKX2-1P43699 TSN-212ENST00000536142 3328 ntTSL 2 BASIC12.08□□□□□ -0.48
NKX2-1P43699 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
NKX2-1P43699 GOLGA6L17P-202ENST00000614358 1398 ntBASIC12.08□□□□□ -0.48
NKX2-1P43699 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 67.6 ms