Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
GDNFP39905 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
GDNFP39905 MRPS18AP1-201ENST00000414458 589 ntBASIC12.88□□□□□ -0.35
GDNFP39905 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC12.88□□□□□ -0.35
GDNFP39905 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC12.88□□□□□ -0.35
GDNFP39905 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
GDNFP39905 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
GDNFP39905 DUT-210ENST00000559935 569 ntTSL 3 BASIC12.88□□□□□ -0.35
GDNFP39905 AC027796.2-201ENST00000575326 344 ntBASIC12.88□□□□□ -0.35
GDNFP39905 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC12.88□□□□□ -0.35
GDNFP39905 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
GDNFP39905 AC004790.1-201ENST00000612686 536 ntBASIC12.88□□□□□ -0.35
GDNFP39905 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC12.88□□□□□ -0.35
GDNFP39905 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
GDNFP39905 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC12.88□□□□□ -0.35
GDNFP39905 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC12.88□□□□□ -0.35
GDNFP39905 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
GDNFP39905 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
GDNFP39905 TNN-202ENST00000621086 4234 ntTSL 5 BASIC12.88□□□□□ -0.35
GDNFP39905 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
GDNFP39905 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC12.88□□□□□ -0.35
GDNFP39905 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
GDNFP39905 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
GDNFP39905 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
GDNFP39905 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
GDNFP39905 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
GDNFP39905 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
GDNFP39905 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
GDNFP39905 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
GDNFP39905 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
GDNFP39905 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
GDNFP39905 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC12.87□□□□□ -0.35
GDNFP39905 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
GDNFP39905 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
GDNFP39905 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
GDNFP39905 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC12.87□□□□□ -0.35
GDNFP39905 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
GDNFP39905 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
GDNFP39905 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC12.87□□□□□ -0.35
GDNFP39905 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
GDNFP39905 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
GDNFP39905 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
GDNFP39905 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC12.87□□□□□ -0.35
GDNFP39905 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
GDNFP39905 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
GDNFP39905 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
GDNFP39905 VMA21-202ENST00000370361 693 ntTSL 5 BASIC12.87□□□□□ -0.35
GDNFP39905 AC015922.1-201ENST00000421102 1152 ntBASIC12.87□□□□□ -0.35
GDNFP39905 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC12.87□□□□□ -0.35
GDNFP39905 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC12.87□□□□□ -0.35
GDNFP39905 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC12.87□□□□□ -0.35
GDNFP39905 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC12.87□□□□□ -0.35
GDNFP39905 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
GDNFP39905 ZNF890P-202ENST00000530367 1156 ntBASIC12.87□□□□□ -0.35
GDNFP39905 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
GDNFP39905 STOM-203ENST00000538954 1257 ntTSL 5 BASIC12.87□□□□□ -0.35
GDNFP39905 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
GDNFP39905 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC12.87□□□□□ -0.35
GDNFP39905 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC12.87□□□□□ -0.35
GDNFP39905 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC12.87□□□□□ -0.35
GDNFP39905 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
GDNFP39905 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
GDNFP39905 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
GDNFP39905 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC12.87□□□□□ -0.35
GDNFP39905 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC12.87□□□□□ -0.35
GDNFP39905 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
GDNFP39905 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
GDNFP39905 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC12.87□□□□□ -0.35
GDNFP39905 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC12.87□□□□□ -0.35
GDNFP39905 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC12.87□□□□□ -0.35
GDNFP39905 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
GDNFP39905 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
GDNFP39905 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
GDNFP39905 AL139385.1-201ENST00000611744 3272 ntBASIC12.87□□□□□ -0.35
GDNFP39905 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC12.87□□□□□ -0.35
GDNFP39905 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
GDNFP39905 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC12.87□□□□□ -0.35
GDNFP39905 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
GDNFP39905 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
GDNFP39905 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
GDNFP39905 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
GDNFP39905 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
GDNFP39905 AL360270.3-201ENST00000609118 1348 ntBASIC12.87□□□□□ -0.35
GDNFP39905 AL731571.1-201ENST00000617058 5428 ntBASIC12.87□□□□□ -0.35
GDNFP39905 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
GDNFP39905 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC12.86□□□□□ -0.35
GDNFP39905 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC12.86□□□□□ -0.35
GDNFP39905 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC12.86□□□□□ -0.35
GDNFP39905 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC12.86□□□□□ -0.35
GDNFP39905 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC12.86□□□□□ -0.35
GDNFP39905 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC12.86□□□□□ -0.35
GDNFP39905 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC12.86□□□□□ -0.35
GDNFP39905 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
GDNFP39905 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC12.86□□□□□ -0.35
GDNFP39905 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
GDNFP39905 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
GDNFP39905 AC022144.1-201ENST00000602255 1580 ntBASIC12.86□□□□□ -0.35
GDNFP39905 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC12.86□□□□□ -0.35
GDNFP39905 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
GDNFP39905 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms