Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CPS1P31327 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC20.08■□□□□ 0.8
CPS1P31327 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC20.08■□□□□ 0.8
CPS1P31327 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC20.08■□□□□ 0.8
CPS1P31327 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.8
CPS1P31327 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CPS1P31327 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
CPS1P31327 BLVRA-201ENST00000265523 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CPS1P31327 IZUMO1R-201ENST00000328458 798 ntAPPRIS P2 TSL 5 BASIC20.07■□□□□ 0.8
CPS1P31327 THYN1-203ENST00000392594 943 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CPS1P31327 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC20.07■□□□□ 0.8
CPS1P31327 AP003785.1-201ENST00000544959 492 ntTSL 4 BASIC20.07■□□□□ 0.8
CPS1P31327 AL157871.1-201ENST00000555428 429 ntTSL 3 BASIC20.07■□□□□ 0.8
CPS1P31327 AC120498.5-201ENST00000561757 299 ntBASIC20.07■□□□□ 0.8
CPS1P31327 YWHAE-212ENST00000575977 540 ntTSL 2 BASIC20.07■□□□□ 0.8
CPS1P31327 TUBB6-214ENST00000592683 481 ntTSL 4 BASIC20.07■□□□□ 0.8
CPS1P31327 AC104506.1-201ENST00000609247 429 ntBASIC20.07■□□□□ 0.8
CPS1P31327 ZNF143-202ENST00000396597 1954 ntTSL 2 BASIC20.07■□□□□ 0.8
CPS1P31327 MAD2L1BP-201ENST00000372171 1301 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CPS1P31327 SIGLEC20P-201ENST00000595243 1311 ntBASIC20.07■□□□□ 0.8
CPS1P31327 AC064801.2-201ENST00000625052 1303 ntBASIC20.07■□□□□ 0.8
CPS1P31327 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CPS1P31327 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC20.07■□□□□ 0.8
CPS1P31327 PARN-202ENST00000420015 2360 ntTSL 2 BASIC20.07■□□□□ 0.8
CPS1P31327 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CPS1P31327 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CPS1P31327 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CPS1P31327 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
CPS1P31327 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CPS1P31327 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC20.07■□□□□ 0.8
CPS1P31327 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC20.07■□□□□ 0.8
CPS1P31327 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC20.07■□□□□ 0.8
CPS1P31327 PITHD1-202ENST00000374524 1292 ntTSL 3 BASIC20.07■□□□□ 0.8
CPS1P31327 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
CPS1P31327 IFITM1-202ENST00000408968 855 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CPS1P31327 AL359853.1-202ENST00000415218 544 ntTSL 2 BASIC20.07■□□□□ 0.8
CPS1P31327 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC20.07■□□□□ 0.8
CPS1P31327 AC019205.2-201ENST00000442007 1083 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CPS1P31327 PRSS3P1-201ENST00000503996 742 ntBASIC20.07■□□□□ 0.8
CPS1P31327 SNHG4-204ENST00000507197 865 ntTSL 2 BASIC20.07■□□□□ 0.8
CPS1P31327 SMIM15-202ENST00000507416 584 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
CPS1P31327 ISL1-203ENST00000511384 981 ntTSL 5 BASIC20.07■□□□□ 0.8
CPS1P31327 AC091588.3-201ENST00000583442 770 ntTSL 3 BASIC20.07■□□□□ 0.8
CPS1P31327 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC20.07■□□□□ 0.8
CPS1P31327 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CPS1P31327 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CPS1P31327 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC20.06■□□□□ 0.8
CPS1P31327 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CPS1P31327 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CPS1P31327 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CPS1P31327 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CPS1P31327 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
CPS1P31327 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC20.06■□□□□ 0.8
CPS1P31327 AC091951.1-201ENST00000512854 2465 ntBASIC20.06■□□□□ 0.8
CPS1P31327 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CPS1P31327 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC20.06■□□□□ 0.8
CPS1P31327 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
CPS1P31327 AK6-202ENST00000380822 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CPS1P31327 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CPS1P31327 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CPS1P31327 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC20.06■□□□□ 0.8
CPS1P31327 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
CPS1P31327 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CPS1P31327 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CPS1P31327 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CPS1P31327 SPATS1-202ENST00000323108 1107 ntAPPRIS P2 TSL 5 BASIC20.06■□□□□ 0.8
CPS1P31327 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CPS1P31327 MYL4-202ENST00000393450 855 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CPS1P31327 KRT8P6-201ENST00000399259 1207 ntBASIC20.06■□□□□ 0.8
CPS1P31327 AL357833.1-201ENST00000413993 832 ntTSL 3 BASIC20.06■□□□□ 0.8
CPS1P31327 PEBP1P3-201ENST00000455475 548 ntBASIC20.06■□□□□ 0.8
CPS1P31327 TMEM14B-215ENST00000481240 1032 ntTSL 2 BASIC20.06■□□□□ 0.8
CPS1P31327 TIMM10-202ENST00000525158 530 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
CPS1P31327 AP003040.1-201ENST00000532044 1024 ntBASIC20.06■□□□□ 0.8
CPS1P31327 BLOC1S1-202ENST00000548556 525 ntTSL 2 BASIC20.06■□□□□ 0.8
CPS1P31327 BIRC5-211ENST00000592734 386 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CPS1P31327 AL009176.1-201ENST00000607876 650 ntBASIC20.06■□□□□ 0.8
CPS1P31327 AC005746.3-201ENST00000614751 393 ntBASIC20.06■□□□□ 0.8
CPS1P31327 SRP19-208ENST00000621420 1270 ntTSL 3 BASIC20.06■□□□□ 0.8
CPS1P31327 AL353658.2-201ENST00000629794 519 ntTSL 5 BASIC20.06■□□□□ 0.8
CPS1P31327 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CPS1P31327 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC20.06■□□□□ 0.8
CPS1P31327 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CPS1P31327 RPAIN-202ENST00000381208 1394 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CPS1P31327 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC20.06■□□□□ 0.8
CPS1P31327 RNF34-211ENST00000613529 1449 ntTSL 2 BASIC20.06■□□□□ 0.8
CPS1P31327 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CPS1P31327 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
CPS1P31327 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC20.05■□□□□ 0.8
CPS1P31327 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CPS1P31327 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
CPS1P31327 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CPS1P31327 AC011270.2-201ENST00000624293 2550 ntBASIC20.05■□□□□ 0.8
CPS1P31327 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CPS1P31327 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CPS1P31327 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
CPS1P31327 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC20.05■□□□□ 0.8
CPS1P31327 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CPS1P31327 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CPS1P31327 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms