Protein–RNA interactions for Protein: P26022

PTX3, Pentraxin-related protein PTX3, humanhuman

Predicted RBP Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3P26022 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PTX3P26022 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PTX3P26022 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PTX3P26022 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PTX3P26022 SNX21-203ENST00000372541 771 ntTSL 2 BASIC14.13□□□□□ -0.15
PTX3P26022 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PTX3P26022 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC14.13□□□□□ -0.15
PTX3P26022 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC14.13□□□□□ -0.15
PTX3P26022 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PTX3P26022 COX5BP1-201ENST00000507622 393 ntBASIC14.13□□□□□ -0.15
PTX3P26022 AHRR-211ENST00000515206 462 ntTSL 5 BASIC14.13□□□□□ -0.15
PTX3P26022 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC14.13□□□□□ -0.15
PTX3P26022 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC14.13□□□□□ -0.15
PTX3P26022 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC14.13□□□□□ -0.15
PTX3P26022 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC14.13□□□□□ -0.15
PTX3P26022 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC14.13□□□□□ -0.15
PTX3P26022 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC14.13□□□□□ -0.15
PTX3P26022 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC14.13□□□□□ -0.15
PTX3P26022 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC14.13□□□□□ -0.15
PTX3P26022 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PTX3P26022 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC14.13□□□□□ -0.15
PTX3P26022 AC008825.2-201ENST00000603374 718 ntBASIC14.13□□□□□ -0.15
PTX3P26022 LINC02084-201ENST00000606069 1096 ntBASIC14.13□□□□□ -0.15
PTX3P26022 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PTX3P26022 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PTX3P26022 AC002472.3-201ENST00000640124 621 ntBASIC14.13□□□□□ -0.15
PTX3P26022 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PTX3P26022 KHSRPP1-201ENST00000427983 1768 ntBASIC14.13□□□□□ -0.15
PTX3P26022 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PTX3P26022 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
PTX3P26022 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
PTX3P26022 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
PTX3P26022 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
PTX3P26022 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
PTX3P26022 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
PTX3P26022 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PTX3P26022 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
PTX3P26022 AC215219.1-201ENST00000400706 1817 ntBASIC14.13□□□□□ -0.15
PTX3P26022 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PTX3P26022 AC090505.1-201ENST00000430515 1834 ntBASIC14.13□□□□□ -0.15
PTX3P26022 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC14.13□□□□□ -0.15
PTX3P26022 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC14.13□□□□□ -0.15
PTX3P26022 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
PTX3P26022 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PTX3P26022 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PTX3P26022 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
PTX3P26022 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PTX3P26022 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PTX3P26022 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC14.12□□□□□ -0.15
PTX3P26022 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC14.12□□□□□ -0.15
PTX3P26022 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
PTX3P26022 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
PTX3P26022 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PTX3P26022 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
PTX3P26022 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PTX3P26022 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PTX3P26022 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
PTX3P26022 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
PTX3P26022 AC005840.4-201ENST00000541242 2494 ntBASIC14.12□□□□□ -0.15
PTX3P26022 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PTX3P26022 GZMB-202ENST00000382540 816 ntTSL 5 BASIC14.12□□□□□ -0.15
PTX3P26022 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
PTX3P26022 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC14.12□□□□□ -0.15
PTX3P26022 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC14.12□□□□□ -0.15
PTX3P26022 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
PTX3P26022 AP000812.2-201ENST00000538934 718 ntBASIC14.12□□□□□ -0.15
PTX3P26022 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC14.12□□□□□ -0.15
PTX3P26022 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
PTX3P26022 AC106886.1-201ENST00000568660 600 ntBASIC14.12□□□□□ -0.15
PTX3P26022 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC14.12□□□□□ -0.15
PTX3P26022 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC14.12□□□□□ -0.15
PTX3P26022 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
PTX3P26022 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC14.12□□□□□ -0.15
PTX3P26022 RHOXF1P1-202ENST00000635473 501 ntBASIC14.12□□□□□ -0.15
PTX3P26022 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PTX3P26022 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PTX3P26022 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
PTX3P26022 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC14.12□□□□□ -0.15
PTX3P26022 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC14.12□□□□□ -0.15
PTX3P26022 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PTX3P26022 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PTX3P26022 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PTX3P26022 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
PTX3P26022 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
PTX3P26022 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
PTX3P26022 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
PTX3P26022 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC14.12□□□□□ -0.15
PTX3P26022 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC14.12□□□□□ -0.15
PTX3P26022 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
PTX3P26022 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PTX3P26022 AHCYP2-201ENST00000430630 1300 ntBASIC14.12□□□□□ -0.15
PTX3P26022 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC14.12□□□□□ -0.15
PTX3P26022 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
PTX3P26022 TNN-203ENST00000622870 3719 ntTSL 5 BASIC14.12□□□□□ -0.15
PTX3P26022 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PTX3P26022 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PTX3P26022 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
PTX3P26022 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PTX3P26022 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
PTX3P26022 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms