Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
COL8A2P25067 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC12.42□□□□□ -0.42
COL8A2P25067 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC12.42□□□□□ -0.42
COL8A2P25067 AC009884.2-201ENST00000603110 324 ntBASIC12.42□□□□□ -0.42
COL8A2P25067 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC12.42□□□□□ -0.42
COL8A2P25067 AL645939.5-201ENST00000606834 243 ntBASIC12.42□□□□□ -0.42
COL8A2P25067 MIR6720-201ENST00000611664 98 ntBASIC12.42□□□□□ -0.42
COL8A2P25067 AL136295.7-201ENST00000619226 1200 ntBASIC12.42□□□□□ -0.42
COL8A2P25067 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC12.42□□□□□ -0.42
COL8A2P25067 Z98259.2-201ENST00000641583 609 ntBASIC12.42□□□□□ -0.42
COL8A2P25067 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
COL8A2P25067 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
COL8A2P25067 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
COL8A2P25067 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
COL8A2P25067 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC12.42□□□□□ -0.42
COL8A2P25067 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC12.42□□□□□ -0.42
COL8A2P25067 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
COL8A2P25067 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
COL8A2P25067 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
COL8A2P25067 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
COL8A2P25067 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
COL8A2P25067 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
COL8A2P25067 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
COL8A2P25067 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
COL8A2P25067 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
COL8A2P25067 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC12.42□□□□□ -0.42
COL8A2P25067 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
COL8A2P25067 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC12.42□□□□□ -0.42
COL8A2P25067 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC12.42□□□□□ -0.42
COL8A2P25067 AC136759.1-202ENST00000530858 2194 ntBASIC12.42□□□□□ -0.42
COL8A2P25067 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC12.42□□□□□ -0.42
COL8A2P25067 AJ011931.1-201ENST00000618749 2492 ntBASIC12.42□□□□□ -0.42
COL8A2P25067 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
COL8A2P25067 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
COL8A2P25067 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
COL8A2P25067 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
COL8A2P25067 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
COL8A2P25067 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
COL8A2P25067 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
COL8A2P25067 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC12.41□□□□□ -0.42
COL8A2P25067 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
COL8A2P25067 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
COL8A2P25067 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
COL8A2P25067 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
COL8A2P25067 AL161772.1-201ENST00000610494 4412 ntBASIC12.41□□□□□ -0.42
COL8A2P25067 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
COL8A2P25067 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
COL8A2P25067 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
COL8A2P25067 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
COL8A2P25067 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
COL8A2P25067 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
COL8A2P25067 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
COL8A2P25067 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC12.41□□□□□ -0.42
COL8A2P25067 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
COL8A2P25067 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
COL8A2P25067 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC12.41□□□□□ -0.42
COL8A2P25067 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
COL8A2P25067 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
COL8A2P25067 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
COL8A2P25067 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC12.41□□□□□ -0.42
COL8A2P25067 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC12.41□□□□□ -0.42
COL8A2P25067 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC12.41□□□□□ -0.42
COL8A2P25067 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
COL8A2P25067 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
COL8A2P25067 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
COL8A2P25067 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC12.41□□□□□ -0.42
COL8A2P25067 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC12.41□□□□□ -0.42
COL8A2P25067 VDAC1P1-201ENST00000439229 848 ntBASIC12.41□□□□□ -0.42
COL8A2P25067 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC12.41□□□□□ -0.42
COL8A2P25067 AL035414.1-201ENST00000451327 857 ntBASIC12.41□□□□□ -0.42
COL8A2P25067 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC12.41□□□□□ -0.42
COL8A2P25067 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
COL8A2P25067 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
COL8A2P25067 HLA-J-204ENST00000495278 958 ntBASIC12.41□□□□□ -0.42
COL8A2P25067 SCARNA21-201ENST00000517026 139 ntBASIC12.41□□□□□ -0.42
COL8A2P25067 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
COL8A2P25067 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC12.41□□□□□ -0.42
COL8A2P25067 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC12.41□□□□□ -0.42
COL8A2P25067 KLK3-207ENST00000595952 969 ntTSL 3 BASIC12.41□□□□□ -0.42
COL8A2P25067 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC12.41□□□□□ -0.42
COL8A2P25067 AC026740.1-201ENST00000607068 791 ntBASIC12.41□□□□□ -0.42
COL8A2P25067 AC091544.8-201ENST00000619490 361 ntBASIC12.41□□□□□ -0.42
COL8A2P25067 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC12.41□□□□□ -0.42
COL8A2P25067 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC12.41□□□□□ -0.42
COL8A2P25067 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC12.41□□□□□ -0.42
COL8A2P25067 AC068587.10-201ENST00000641210 219 ntBASIC12.41□□□□□ -0.42
COL8A2P25067 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
COL8A2P25067 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC12.41□□□□□ -0.42
COL8A2P25067 BANP-203ENST00000393207 2438 ntTSL 2 BASIC12.41□□□□□ -0.42
COL8A2P25067 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
COL8A2P25067 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
COL8A2P25067 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
COL8A2P25067 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC12.41□□□□□ -0.42
COL8A2P25067 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
COL8A2P25067 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
COL8A2P25067 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
COL8A2P25067 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
COL8A2P25067 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
COL8A2P25067 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC12.41□□□□□ -0.42
COL8A2P25067 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms