Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 SPDYE7P-202ENST00000420373 878 ntBASIC12.94□□□□□ -0.34
RAB3BP20337 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RAB3BP20337 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC12.94□□□□□ -0.34
RAB3BP20337 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC12.94□□□□□ -0.34
RAB3BP20337 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC12.94□□□□□ -0.34
RAB3BP20337 NMU-202ENST00000505262 693 ntTSL 3 BASIC12.94□□□□□ -0.34
RAB3BP20337 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC12.94□□□□□ -0.34
RAB3BP20337 AC093520.2-201ENST00000561830 333 ntBASIC12.94□□□□□ -0.34
RAB3BP20337 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
RAB3BP20337 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC12.94□□□□□ -0.34
RAB3BP20337 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
RAB3BP20337 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC12.94□□□□□ -0.34
RAB3BP20337 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
RAB3BP20337 AL365181.3-201ENST00000605886 3222 ntBASIC12.94□□□□□ -0.34
RAB3BP20337 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
RAB3BP20337 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
RAB3BP20337 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RAB3BP20337 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RAB3BP20337 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC12.94□□□□□ -0.34
RAB3BP20337 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC12.94□□□□□ -0.34
RAB3BP20337 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RAB3BP20337 AC015688.4-201ENST00000580780 1647 ntBASIC12.94□□□□□ -0.34
RAB3BP20337 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
RAB3BP20337 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC12.94□□□□□ -0.34
RAB3BP20337 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RAB3BP20337 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC12.94□□□□□ -0.34
RAB3BP20337 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
RAB3BP20337 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RAB3BP20337 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
RAB3BP20337 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC12.94□□□□□ -0.34
RAB3BP20337 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
RAB3BP20337 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC12.94□□□□□ -0.34
RAB3BP20337 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RAB3BP20337 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC12.94□□□□□ -0.34
RAB3BP20337 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC12.94□□□□□ -0.34
RAB3BP20337 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC12.94□□□□□ -0.34
RAB3BP20337 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
RAB3BP20337 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
RAB3BP20337 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC12.94□□□□□ -0.34
RAB3BP20337 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RAB3BP20337 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RAB3BP20337 ZMYM3-207ENST00000373998 6067 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
RAB3BP20337 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
RAB3BP20337 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC12.93□□□□□ -0.34
RAB3BP20337 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RAB3BP20337 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RAB3BP20337 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC12.93□□□□□ -0.34
RAB3BP20337 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
RAB3BP20337 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
RAB3BP20337 TNPO2-218ENST00000592287 2914 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
RAB3BP20337 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
RAB3BP20337 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RAB3BP20337 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
RAB3BP20337 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RAB3BP20337 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
RAB3BP20337 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
RAB3BP20337 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RAB3BP20337 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC12.93□□□□□ -0.34
RAB3BP20337 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC12.93□□□□□ -0.34
RAB3BP20337 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RAB3BP20337 TNN-202ENST00000621086 4234 ntTSL 5 BASIC12.93□□□□□ -0.34
RAB3BP20337 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
RAB3BP20337 TSN-212ENST00000536142 3328 ntTSL 2 BASIC12.93□□□□□ -0.34
RAB3BP20337 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RAB3BP20337 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC12.93□□□□□ -0.34
RAB3BP20337 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
RAB3BP20337 RPL30-202ENST00000396070 440 ntTSL 2 BASIC12.93□□□□□ -0.34
RAB3BP20337 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC12.93□□□□□ -0.34
RAB3BP20337 AC004832.2-201ENST00000426397 482 ntBASIC12.93□□□□□ -0.34
RAB3BP20337 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
RAB3BP20337 ALG1L5P-201ENST00000482043 771 ntBASIC12.93□□□□□ -0.34
RAB3BP20337 AC010336.2-201ENST00000564226 506 ntBASIC12.93□□□□□ -0.34
RAB3BP20337 AC051619.7-201ENST00000568314 623 ntBASIC12.93□□□□□ -0.34
RAB3BP20337 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
RAB3BP20337 MTDHP5-201ENST00000598980 586 ntBASIC12.93□□□□□ -0.34
RAB3BP20337 GPER1-207ENST00000619052 571 ntTSL 2 BASIC12.93□□□□□ -0.34
RAB3BP20337 AL513210.1-201ENST00000629608 234 ntBASIC12.93□□□□□ -0.34
RAB3BP20337 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
RAB3BP20337 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
RAB3BP20337 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
RAB3BP20337 HECTD1-203ENST00000553700 9080 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
RAB3BP20337 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC12.93□□□□□ -0.34
RAB3BP20337 TRPA1-201ENST00000262209 5223 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RAB3BP20337 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC12.93□□□□□ -0.34
RAB3BP20337 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
RAB3BP20337 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
RAB3BP20337 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC12.93□□□□□ -0.34
RAB3BP20337 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RAB3BP20337 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC12.93□□□□□ -0.34
RAB3BP20337 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RAB3BP20337 IL21R-204ENST00000564089 3009 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
RAB3BP20337 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
RAB3BP20337 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RAB3BP20337 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RAB3BP20337 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
RAB3BP20337 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RAB3BP20337 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
RAB3BP20337 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RAB3BP20337 STAG3-206ENST00000426455 4450 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
RAB3BP20337 PCDHGA3-201ENST00000253812 4771 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms