Protein–RNA interactions for Protein: P19338

NCL, Nucleolin, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP19338 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC17.64■□□□□ 0.41
NCLP19338 MAPT-IT1-201ENST00000624111 3016 ntBASIC17.64■□□□□ 0.41
NCLP19338 AC108002.1-201ENST00000520572 5684 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NCLP19338 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC17.64■□□□□ 0.41
NCLP19338 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
NCLP19338 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NCLP19338 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
NCLP19338 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
NCLP19338 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
NCLP19338 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NCLP19338 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
NCLP19338 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
NCLP19338 SON-203ENST00000381679 7860 ntTSL 5 BASIC17.63■□□□□ 0.41
NCLP19338 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NCLP19338 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NCLP19338 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NCLP19338 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NCLP19338 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NCLP19338 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
NCLP19338 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NCLP19338 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC17.63■□□□□ 0.41
NCLP19338 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
NCLP19338 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NCLP19338 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC17.63■□□□□ 0.41
NCLP19338 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NCLP19338 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NCLP19338 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NCLP19338 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
NCLP19338 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC17.63■□□□□ 0.41
NCLP19338 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NCLP19338 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC17.63■□□□□ 0.41
NCLP19338 DAAM2-202ENST00000398904 6224 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
NCLP19338 RGMA-203ENST00000542321 3038 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
NCLP19338 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NCLP19338 AL157414.3-201ENST00000624276 1954 ntBASIC17.63■□□□□ 0.41
NCLP19338 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
NCLP19338 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NCLP19338 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NCLP19338 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NCLP19338 AC104457.1-201ENST00000401024 814 ntBASIC17.63■□□□□ 0.41
NCLP19338 WBP2-203ENST00000433525 928 ntTSL 2 BASIC17.63■□□□□ 0.41
NCLP19338 CRB3P1-201ENST00000449338 276 ntBASIC17.63■□□□□ 0.41
NCLP19338 TMPRSS11CP-201ENST00000453277 683 ntBASIC17.63■□□□□ 0.41
NCLP19338 TPT1P11-201ENST00000458482 498 ntBASIC17.63■□□□□ 0.41
NCLP19338 RN7SL618P-201ENST00000477850 296 ntBASIC17.63■□□□□ 0.41
NCLP19338 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
NCLP19338 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
NCLP19338 SAMD11P1-201ENST00000571429 661 ntBASIC17.63■□□□□ 0.41
NCLP19338 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
NCLP19338 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
NCLP19338 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC17.63■□□□□ 0.41
NCLP19338 AC074044.1-201ENST00000609673 707 ntBASIC17.63■□□□□ 0.41
NCLP19338 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC17.63■□□□□ 0.41
NCLP19338 GPR39-203ENST00000622084 900 ntTSL 5 BASIC17.63■□□□□ 0.41
NCLP19338 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC17.63■□□□□ 0.41
NCLP19338 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC17.63■□□□□ 0.41
NCLP19338 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NCLP19338 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NCLP19338 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
NCLP19338 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC17.63■□□□□ 0.41
NCLP19338 AC023090.2-201ENST00000625182 2110 ntBASIC17.63■□□□□ 0.41
NCLP19338 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NCLP19338 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NCLP19338 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
NCLP19338 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC17.63■□□□□ 0.41
NCLP19338 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
NCLP19338 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NCLP19338 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
NCLP19338 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
NCLP19338 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NCLP19338 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
NCLP19338 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NCLP19338 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NCLP19338 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
NCLP19338 AC099521.3-201ENST00000624251 2938 ntBASIC17.62■□□□□ 0.41
NCLP19338 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
NCLP19338 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC17.62■□□□□ 0.41
NCLP19338 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
NCLP19338 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
NCLP19338 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NCLP19338 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC17.62■□□□□ 0.41
NCLP19338 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC17.62■□□□□ 0.41
NCLP19338 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NCLP19338 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
NCLP19338 SFI1-229ENST00000540643 4226 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
NCLP19338 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
NCLP19338 HECTD2-201ENST00000298068 4802 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NCLP19338 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NCLP19338 PIN1P1-201ENST00000412108 996 ntBASIC17.62■□□□□ 0.41
NCLP19338 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC17.62■□□□□ 0.41
NCLP19338 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC17.62■□□□□ 0.41
NCLP19338 STOM-203ENST00000538954 1257 ntTSL 5 BASIC17.62■□□□□ 0.41
NCLP19338 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC17.62■□□□□ 0.41
NCLP19338 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
NCLP19338 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
NCLP19338 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC17.62■□□□□ 0.41
NCLP19338 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC17.62■□□□□ 0.41
NCLP19338 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NCLP19338 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NCLP19338 AL356585.2-201ENST00000625078 2396 ntBASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms