Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDH1P12830 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDH1P12830 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC14.38□□□□□ -0.11
CDH1P12830 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDH1P12830 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDH1P12830 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDH1P12830 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDH1P12830 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CDH1P12830 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
CDH1P12830 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC14.38□□□□□ -0.11
CDH1P12830 AC079776.1-201ENST00000401540 1152 ntBASIC14.38□□□□□ -0.11
CDH1P12830 ARSEP1-201ENST00000420443 635 ntBASIC14.38□□□□□ -0.11
CDH1P12830 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC14.38□□□□□ -0.11
CDH1P12830 FAM8A4P-201ENST00000435433 1213 ntBASIC14.38□□□□□ -0.11
CDH1P12830 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC14.38□□□□□ -0.11
CDH1P12830 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC14.38□□□□□ -0.11
CDH1P12830 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC14.38□□□□□ -0.11
CDH1P12830 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CDH1P12830 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
CDH1P12830 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC14.38□□□□□ -0.11
CDH1P12830 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC14.38□□□□□ -0.11
CDH1P12830 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CDH1P12830 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CDH1P12830 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC14.38□□□□□ -0.11
CDH1P12830 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC14.38□□□□□ -0.11
CDH1P12830 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDH1P12830 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDH1P12830 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDH1P12830 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CDH1P12830 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC14.38□□□□□ -0.11
CDH1P12830 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CDH1P12830 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDH1P12830 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CDH1P12830 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDH1P12830 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
CDH1P12830 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDH1P12830 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
CDH1P12830 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
CDH1P12830 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDH1P12830 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDH1P12830 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CDH1P12830 AL136172.1-201ENST00000598590 1394 ntBASIC14.37□□□□□ -0.11
CDH1P12830 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDH1P12830 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CDH1P12830 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDH1P12830 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
CDH1P12830 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDH1P12830 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDH1P12830 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDH1P12830 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC14.37□□□□□ -0.11
CDH1P12830 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDH1P12830 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDH1P12830 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDH1P12830 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDH1P12830 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDH1P12830 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDH1P12830 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDH1P12830 BOLA2P3-201ENST00000404566 256 ntBASIC14.37□□□□□ -0.11
CDH1P12830 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CDH1P12830 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDH1P12830 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
CDH1P12830 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CDH1P12830 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC14.37□□□□□ -0.11
CDH1P12830 RPL7P3-201ENST00000441388 714 ntBASIC14.37□□□□□ -0.11
CDH1P12830 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC14.37□□□□□ -0.11
CDH1P12830 KLF2P4-201ENST00000451959 1225 ntBASIC14.37□□□□□ -0.11
CDH1P12830 CTBP2P5-201ENST00000454986 1264 ntBASIC14.37□□□□□ -0.11
CDH1P12830 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC14.37□□□□□ -0.11
CDH1P12830 AHRR-211ENST00000515206 462 ntTSL 5 BASIC14.37□□□□□ -0.11
CDH1P12830 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC14.37□□□□□ -0.11
CDH1P12830 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC14.37□□□□□ -0.11
CDH1P12830 AC006453.4-201ENST00000636949 1252 ntBASIC14.37□□□□□ -0.11
CDH1P12830 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDH1P12830 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDH1P12830 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDH1P12830 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CDH1P12830 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
CDH1P12830 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
CDH1P12830 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDH1P12830 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
CDH1P12830 ANKRD30BP2-201ENST00000435744 1610 ntBASIC14.37□□□□□ -0.11
CDH1P12830 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
CDH1P12830 AC009093.2-202ENST00000620513 2079 ntBASIC14.37□□□□□ -0.11
CDH1P12830 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDH1P12830 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CDH1P12830 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDH1P12830 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDH1P12830 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDH1P12830 USP31-203ENST00000567975 2142 ntTSL 2 BASIC14.36□□□□□ -0.11
CDH1P12830 AL354702.1-201ENST00000442006 1960 ntBASIC14.36□□□□□ -0.11
CDH1P12830 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC14.36□□□□□ -0.11
CDH1P12830 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDH1P12830 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC14.36□□□□□ -0.11
CDH1P12830 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
CDH1P12830 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CDH1P12830 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CDH1P12830 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC14.36□□□□□ -0.11
CDH1P12830 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC14.36□□□□□ -0.11
CDH1P12830 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC14.36□□□□□ -0.11
CDH1P12830 AP000593.2-201ENST00000542775 1433 ntBASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms