Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PDGFBP01127 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PDGFBP01127 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
PDGFBP01127 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PDGFBP01127 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
PDGFBP01127 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC14.51□□□□□ -0.09
PDGFBP01127 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC14.51□□□□□ -0.09
PDGFBP01127 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC14.51□□□□□ -0.09
PDGFBP01127 AC008536.3-201ENST00000623282 1599 ntBASIC14.51□□□□□ -0.09
PDGFBP01127 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PDGFBP01127 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
PDGFBP01127 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PDGFBP01127 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
PDGFBP01127 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC14.5□□□□□ -0.09
PDGFBP01127 PCK2-208ENST00000559250 1804 ntTSL 5 BASIC14.5□□□□□ -0.09
PDGFBP01127 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
PDGFBP01127 KCTD6-205ENST00000490264 1759 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
PDGFBP01127 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PDGFBP01127 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PDGFBP01127 C12orf65-204ENST00000429587 1326 ntAPPRIS P2 TSL 2 BASIC14.5□□□□□ -0.09
PDGFBP01127 PRMT2-216ENST00000621201 1301 ntTSL 5 BASIC14.5□□□□□ -0.09
PDGFBP01127 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PDGFBP01127 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PDGFBP01127 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
PDGFBP01127 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PDGFBP01127 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PDGFBP01127 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PDGFBP01127 DYNLT1-201ENST00000367085 774 ntTSL 2 BASIC14.5□□□□□ -0.09
PDGFBP01127 IFNLR1-204ENST00000374419 953 ntTSL 5 BASIC14.5□□□□□ -0.09
PDGFBP01127 LINC01983-201ENST00000413586 574 ntTSL 2 BASIC14.5□□□□□ -0.09
PDGFBP01127 OR52M2P-201ENST00000414298 959 ntBASIC14.5□□□□□ -0.09
PDGFBP01127 IFI35-204ENST00000438323 1232 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
PDGFBP01127 GOLGA6L16P-201ENST00000441780 1299 ntBASIC14.5□□□□□ -0.09
PDGFBP01127 SOD2-205ENST00000444946 917 ntTSL 2 BASIC14.5□□□□□ -0.09
PDGFBP01127 IGKV1OR-2-201ENST00000457995 350 ntBASIC14.5□□□□□ -0.09
PDGFBP01127 RPS18P9-201ENST00000482817 460 ntBASIC14.5□□□□□ -0.09
PDGFBP01127 BCRP4-201ENST00000506079 804 ntBASIC14.5□□□□□ -0.09
PDGFBP01127 GPX3-202ENST00000517973 612 ntTSL 3 BASIC14.5□□□□□ -0.09
PDGFBP01127 AC111149.2-202ENST00000518355 599 ntTSL 4 BASIC14.5□□□□□ -0.09
PDGFBP01127 AP004550.1-201ENST00000532652 514 ntTSL 3 BASIC14.5□□□□□ -0.09
PDGFBP01127 F11R-204ENST00000537746 1245 ntTSL 2 BASIC14.5□□□□□ -0.09
PDGFBP01127 RPL18-205ENST00000549273 1036 ntTSL 2 BASIC14.5□□□□□ -0.09
PDGFBP01127 CR383656.13-201ENST00000550928 563 ntTSL 3 BASIC14.5□□□□□ -0.09
PDGFBP01127 AL512310.10-201ENST00000555580 563 ntTSL 3 BASIC14.5□□□□□ -0.09
PDGFBP01127 AC091304.3-201ENST00000566500 716 ntBASIC14.5□□□□□ -0.09
PDGFBP01127 NDUFB10P1-201ENST00000567319 521 ntBASIC14.5□□□□□ -0.09
PDGFBP01127 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC14.5□□□□□ -0.09
PDGFBP01127 AC008906.2-201ENST00000606656 474 ntTSL 2 BASIC14.5□□□□□ -0.09
PDGFBP01127 AL135936.1-201ENST00000617956 998 ntTSL 5 BASIC14.5□□□□□ -0.09
PDGFBP01127 AL591471.1-201ENST00000621855 229 ntBASIC14.5□□□□□ -0.09
PDGFBP01127 ADAMTS9-AS1-216ENST00000626280 882 ntTSL 5 BASIC14.5□□□□□ -0.09
PDGFBP01127 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC14.5□□□□□ -0.09
PDGFBP01127 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
PDGFBP01127 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PDGFBP01127 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC14.5□□□□□ -0.09
PDGFBP01127 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PDGFBP01127 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PDGFBP01127 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PDGFBP01127 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC14.5□□□□□ -0.09
PDGFBP01127 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC14.5□□□□□ -0.09
PDGFBP01127 LUC7L2-208ENST00000541170 1525 ntTSL 2 BASIC14.5□□□□□ -0.09
PDGFBP01127 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PDGFBP01127 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
PDGFBP01127 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PDGFBP01127 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PDGFBP01127 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
PDGFBP01127 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC14.5□□□□□ -0.09
PDGFBP01127 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PDGFBP01127 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
PDGFBP01127 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC14.5□□□□□ -0.09
PDGFBP01127 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
PDGFBP01127 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC14.5□□□□□ -0.09
PDGFBP01127 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC14.5□□□□□ -0.09
PDGFBP01127 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PDGFBP01127 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PDGFBP01127 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PDGFBP01127 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PDGFBP01127 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
PDGFBP01127 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
PDGFBP01127 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PDGFBP01127 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PDGFBP01127 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PDGFBP01127 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PDGFBP01127 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PDGFBP01127 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PDGFBP01127 TMEM14C-201ENST00000229563 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PDGFBP01127 FAU-201ENST00000279259 461 ntTSL 2 BASIC14.49□□□□□ -0.09
PDGFBP01127 CLCC1-202ENST00000348264 1124 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PDGFBP01127 GAS5-209ENST00000430245 723 ntTSL 3 BASIC14.49□□□□□ -0.09
PDGFBP01127 AP001057.1-201ENST00000437557 799 ntTSL 5 BASIC14.49□□□□□ -0.09
PDGFBP01127 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC14.49□□□□□ -0.09
PDGFBP01127 AC002127.2-201ENST00000444032 792 ntTSL 3 BASIC14.49□□□□□ -0.09
PDGFBP01127 GRPEL2P1-201ENST00000453145 339 ntBASIC14.49□□□□□ -0.09
PDGFBP01127 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PDGFBP01127 PFN2-212ENST00000490975 858 ntTSL 4 BASIC14.49□□□□□ -0.09
PDGFBP01127 RORA-AS1-201ENST00000501579 761 ntTSL 5 BASIC14.49□□□□□ -0.09
PDGFBP01127 EEF1GP8-201ENST00000506566 1154 ntBASIC14.49□□□□□ -0.09
PDGFBP01127 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC14.49□□□□□ -0.09
PDGFBP01127 CDIPT-AS1-202ENST00000565014 729 ntTSL 2 BASIC14.49□□□□□ -0.09
PDGFBP01127 MT1G-203ENST00000568675 628 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms