Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
LTN1O94822 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC18.86■□□□□ 0.61
LTN1O94822 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC18.86■□□□□ 0.61
LTN1O94822 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LTN1O94822 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC18.86■□□□□ 0.61
LTN1O94822 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC18.86■□□□□ 0.61
LTN1O94822 TUBB8P4-201ENST00000511806 1324 ntBASIC18.86■□□□□ 0.61
LTN1O94822 OR4S1-201ENST00000319988 930 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
LTN1O94822 CFAP36-203ENST00000403007 759 ntTSL 2 BASIC18.86■□□□□ 0.61
LTN1O94822 AC005486.1-201ENST00000466775 216 ntTSL 3 BASIC18.86■□□□□ 0.61
LTN1O94822 POLR2J3-217ENST00000513438 546 ntTSL 3 BASIC18.86■□□□□ 0.61
LTN1O94822 IMMP1L-202ENST00000526776 469 ntTSL 3 BASIC18.86■□□□□ 0.61
LTN1O94822 SRP14-204ENST00000558720 780 ntTSL 2 BASIC18.86■□□□□ 0.61
LTN1O94822 RN7SL596P-201ENST00000582123 288 ntBASIC18.86■□□□□ 0.61
LTN1O94822 EIF5AP2-201ENST00000585668 1047 ntBASIC18.86■□□□□ 0.61
LTN1O94822 MCEMP1-202ENST00000597445 763 ntAPPRIS ALT2 TSL 3 BASIC18.86■□□□□ 0.61
LTN1O94822 HTR4-213ENST00000631296 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LTN1O94822 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
LTN1O94822 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LTN1O94822 AC106707.1-201ENST00000475981 1640 ntTSL 2 BASIC18.85■□□□□ 0.61
LTN1O94822 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
LTN1O94822 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
LTN1O94822 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LTN1O94822 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
LTN1O94822 MRPL55-205ENST00000366731 1423 ntTSL 2 BASIC18.85■□□□□ 0.61
LTN1O94822 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC18.85■□□□□ 0.61
LTN1O94822 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LTN1O94822 MED7-202ENST00000420343 1382 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
LTN1O94822 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LTN1O94822 ARL1-202ENST00000536227 1322 ntTSL 2 BASIC18.85■□□□□ 0.61
LTN1O94822 LINC00470-210ENST00000584090 1334 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LTN1O94822 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
LTN1O94822 DIO1-203ENST00000388876 606 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LTN1O94822 AP002856.2-201ENST00000416553 584 ntTSL 3 BASIC18.85■□□□□ 0.61
LTN1O94822 BPIFB5P-201ENST00000457066 1099 ntBASIC18.85■□□□□ 0.61
LTN1O94822 AC105390.1-201ENST00000511330 560 ntTSL 4 BASIC18.85■□□□□ 0.61
LTN1O94822 DIO1-204ENST00000524406 626 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LTN1O94822 DIO1-213ENST00000532493 406 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LTN1O94822 AL136982.5-201ENST00000605222 294 ntBASIC18.85■□□□□ 0.61
LTN1O94822 COQ4-204ENST00000608951 781 ntTSL 2 BASIC18.85■□□□□ 0.61
LTN1O94822 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC18.85■□□□□ 0.61
LTN1O94822 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
LTN1O94822 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LTN1O94822 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LTN1O94822 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LTN1O94822 AL022313.4-201ENST00000562756 2046 ntBASIC18.85■□□□□ 0.61
LTN1O94822 IMMT-212ENST00000620815 1520 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LTN1O94822 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC18.85■□□□□ 0.61
LTN1O94822 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LTN1O94822 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LTN1O94822 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LTN1O94822 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC18.84■□□□□ 0.61
LTN1O94822 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
LTN1O94822 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC18.84■□□□□ 0.61
LTN1O94822 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC18.84■□□□□ 0.61
LTN1O94822 AC008741.2-201ENST00000612792 3115 ntBASIC18.84■□□□□ 0.61
LTN1O94822 COPS7B-204ENST00000409091 806 ntTSL 5 BASIC18.84■□□□□ 0.61
LTN1O94822 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC18.84■□□□□ 0.61
LTN1O94822 DLEU2-205ENST00000443587 705 ntTSL 5 BASIC18.84■□□□□ 0.61
LTN1O94822 AC023968.2-201ENST00000560593 1049 ntBASIC18.84■□□□□ 0.61
LTN1O94822 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LTN1O94822 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
LTN1O94822 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC18.84■□□□□ 0.61
LTN1O94822 ZFP1-201ENST00000332307 1502 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LTN1O94822 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LTN1O94822 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC18.84■□□□□ 0.61
LTN1O94822 TMEM182-201ENST00000409173 3198 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LTN1O94822 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC18.84■□□□□ 0.61
LTN1O94822 FUK-207ENST00000571514 3054 ntTSL 2 BASIC18.84■□□□□ 0.61
LTN1O94822 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LTN1O94822 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LTN1O94822 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LTN1O94822 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LTN1O94822 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
LTN1O94822 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
LTN1O94822 ZNRD1-203ENST00000376782 736 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
LTN1O94822 TRBV7-3-201ENST00000390361 397 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
LTN1O94822 ABCD1P4-201ENST00000399687 604 ntBASIC18.83■□□□□ 0.61
LTN1O94822 LINP1-201ENST00000417112 917 ntTSL 2 BASIC18.83■□□□□ 0.61
LTN1O94822 FOXP4-AS1-202ENST00000432751 409 ntTSL 2 BASIC18.83■□□□□ 0.61
LTN1O94822 PFN2-212ENST00000490975 858 ntTSL 4 BASIC18.83■□□□□ 0.61
LTN1O94822 AC093300.1-201ENST00000510368 1201 ntBASIC18.83■□□□□ 0.61
LTN1O94822 FAM86B3P-203ENST00000523992 854 ntBASIC18.83■□□□□ 0.61
LTN1O94822 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC18.83■□□□□ 0.61
LTN1O94822 AL049840.2-201ENST00000602722 535 ntBASIC18.83■□□□□ 0.61
LTN1O94822 RNF103-CHMP3-202ENST00000604011 1135 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
LTN1O94822 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.61
LTN1O94822 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC18.83■□□□□ 0.61
LTN1O94822 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
LTN1O94822 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
LTN1O94822 AC004554.1-201ENST00000422830 1468 ntBASIC18.83■□□□□ 0.61
LTN1O94822 NIPA1-207ENST00000561183 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
LTN1O94822 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
LTN1O94822 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LTN1O94822 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
LTN1O94822 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
LTN1O94822 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
LTN1O94822 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC18.83■□□□□ 0.6
LTN1O94822 OTOS-201ENST00000319460 566 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
LTN1O94822 MIR1301-201ENST00000408518 82 ntBASIC18.83■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms