Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
UPK1BO75841 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC12.79□□□□□ -0.36
UPK1BO75841 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC12.79□□□□□ -0.36
UPK1BO75841 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC12.79□□□□□ -0.36
UPK1BO75841 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC12.79□□□□□ -0.36
UPK1BO75841 LINC01165-201ENST00000445190 1623 ntBASIC12.79□□□□□ -0.36
UPK1BO75841 SLC26A6-207ENST00000420764 2630 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
UPK1BO75841 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC12.79□□□□□ -0.36
UPK1BO75841 SYNJ2-208ENST00000640338 3959 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
UPK1BO75841 CHD5-201ENST00000262450 9646 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
UPK1BO75841 PLIN3-201ENST00000221957 2333 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
UPK1BO75841 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC12.79□□□□□ -0.36
UPK1BO75841 GHITM-201ENST00000372134 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
UPK1BO75841 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
UPK1BO75841 DEK-201ENST00000244776 1441 ntTSL 2 BASIC12.79□□□□□ -0.36
UPK1BO75841 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
UPK1BO75841 SLC13A4-201ENST00000354042 2897 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
UPK1BO75841 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC12.78□□□□□ -0.36
UPK1BO75841 TRPA1-201ENST00000262209 5223 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
UPK1BO75841 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
UPK1BO75841 PIK3R5-220ENST00000623421 4318 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
UPK1BO75841 DDX54-201ENST00000306014 4377 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
UPK1BO75841 AC022364.1-202ENST00000617468 2409 ntBASIC12.78□□□□□ -0.36
UPK1BO75841 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
UPK1BO75841 TRAPPC9-201ENST00000389328 4474 ntTSL 2 BASIC12.78□□□□□ -0.36
UPK1BO75841 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC12.78□□□□□ -0.36
UPK1BO75841 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
UPK1BO75841 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
UPK1BO75841 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
UPK1BO75841 EPN2-202ENST00000347697 4664 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
UPK1BO75841 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
UPK1BO75841 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
UPK1BO75841 USP40-206ENST00000443711 628 ntTSL 2 BASIC12.78□□□□□ -0.36
UPK1BO75841 NMU-203ENST00000507338 658 ntTSL 3 BASIC12.78□□□□□ -0.36
UPK1BO75841 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
UPK1BO75841 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC12.78□□□□□ -0.36
UPK1BO75841 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
UPK1BO75841 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC12.78□□□□□ -0.36
UPK1BO75841 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC12.78□□□□□ -0.36
UPK1BO75841 AC005593.1-201ENST00000624894 515 ntBASIC12.78□□□□□ -0.36
UPK1BO75841 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC12.78□□□□□ -0.36
UPK1BO75841 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
UPK1BO75841 MSNP1-201ENST00000511640 1732 ntBASIC12.78□□□□□ -0.36
UPK1BO75841 MKNK1-201ENST00000341183 2612 ntTSL 5 BASIC12.78□□□□□ -0.36
UPK1BO75841 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
UPK1BO75841 LINC00343-203ENST00000454555 1765 ntTSL 2 BASIC12.78□□□□□ -0.36
UPK1BO75841 RFWD3-201ENST00000361070 4957 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
UPK1BO75841 XRCC6-201ENST00000359308 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
UPK1BO75841 POTEB3-201ENST00000611217 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
UPK1BO75841 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
UPK1BO75841 ZMYM3-207ENST00000373998 6067 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
UPK1BO75841 CANX-202ENST00000452673 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
UPK1BO75841 NRP1-202ENST00000374816 2804 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
UPK1BO75841 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
UPK1BO75841 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC12.78□□□□□ -0.36
UPK1BO75841 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
UPK1BO75841 NOA1-201ENST00000264230 3415 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
UPK1BO75841 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
UPK1BO75841 ADCYAP1R1-201ENST00000304166 6487 ntAPPRIS P3 TSL 2 BASIC12.78□□□□□ -0.36
UPK1BO75841 HDAC8-207ENST00000373573 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
UPK1BO75841 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
UPK1BO75841 PGBD1-201ENST00000259883 3100 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
UPK1BO75841 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
UPK1BO75841 EOGT-202ENST00000383701 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
UPK1BO75841 SPOCK2-201ENST00000317376 5328 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
UPK1BO75841 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
UPK1BO75841 CDCA3-202ENST00000422785 2760 ntTSL 2 BASIC12.77□□□□□ -0.36
UPK1BO75841 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
UPK1BO75841 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
UPK1BO75841 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.36
UPK1BO75841 TRAK1-210ENST00000613405 4672 ntTSL 2 BASIC12.77□□□□□ -0.36
UPK1BO75841 EME1-202ENST00000393271 2354 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
UPK1BO75841 EGFLAM-204ENST00000397202 2398 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
UPK1BO75841 MATN2-211ENST00000521689 3554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
UPK1BO75841 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
UPK1BO75841 APLP2-202ENST00000278756 3687 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
UPK1BO75841 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
UPK1BO75841 FOXN3-201ENST00000261302 2542 ntAPPRIS ALT1 TSL 5 BASIC12.77□□□□□ -0.37
UPK1BO75841 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
UPK1BO75841 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
UPK1BO75841 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
UPK1BO75841 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
UPK1BO75841 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC12.77□□□□□ -0.37
UPK1BO75841 FO393414.2-201ENST00000405153 598 ntBASIC12.77□□□□□ -0.37
UPK1BO75841 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC12.77□□□□□ -0.37
UPK1BO75841 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC12.77□□□□□ -0.37
UPK1BO75841 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
UPK1BO75841 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC12.77□□□□□ -0.37
UPK1BO75841 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC12.77□□□□□ -0.37
UPK1BO75841 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
UPK1BO75841 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
UPK1BO75841 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
UPK1BO75841 BAP1-211ENST00000615113 489 ntBASIC12.77□□□□□ -0.37
UPK1BO75841 GPR39-203ENST00000622084 900 ntTSL 5 BASIC12.77□□□□□ -0.37
UPK1BO75841 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC12.77□□□□□ -0.37
UPK1BO75841 TBX3-202ENST00000349155 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
UPK1BO75841 AC019205.2-203ENST00000421315 3362 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
UPK1BO75841 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC12.77□□□□□ -0.37
UPK1BO75841 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC12.77□□□□□ -0.37
UPK1BO75841 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC12.77□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms