Protein–RNA interactions for Protein: O43924

PDE6D, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, humanhuman

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6DO43924 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC11.43□□□□□ -0.58
PDE6DO43924 OR4K13-203ENST00000641904 5684 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
PDE6DO43924 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
PDE6DO43924 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
PDE6DO43924 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC11.43□□□□□ -0.58
PDE6DO43924 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
PDE6DO43924 GRIA4-201ENST00000282499 5508 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
PDE6DO43924 CYP26B1-205ENST00000546307 4331 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
PDE6DO43924 NRXN1-210ENST00000406316 9375 ntAPPRIS P3 TSL 5 BASIC11.43□□□□□ -0.58
PDE6DO43924 DLGAP1-201ENST00000315677 6683 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
PDE6DO43924 EWSAT1-201ENST00000415504 2214 ntTSL 2 BASIC11.43□□□□□ -0.58
PDE6DO43924 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
PDE6DO43924 STRIP2-201ENST00000249344 5115 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
PDE6DO43924 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
PDE6DO43924 TGM2-201ENST00000361475 5070 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
PDE6DO43924 RUBCNL-201ENST00000378781 3322 ntAPPRIS ALT2 TSL 2 BASIC11.43□□□□□ -0.58
PDE6DO43924 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC11.43□□□□□ -0.58
PDE6DO43924 RERE-202ENST00000377464 6733 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
PDE6DO43924 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
PDE6DO43924 JADE1-209ENST00000511647 3560 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
PDE6DO43924 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
PDE6DO43924 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
PDE6DO43924 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
PDE6DO43924 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
PDE6DO43924 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
PDE6DO43924 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
PDE6DO43924 KRT18P64-201ENST00000434946 1219 ntBASIC11.43□□□□□ -0.58
PDE6DO43924 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC11.43□□□□□ -0.58
PDE6DO43924 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC11.43□□□□□ -0.58
PDE6DO43924 TBCB-205ENST00000585746 875 ntTSL 3 BASIC11.43□□□□□ -0.58
PDE6DO43924 SSH2-211ENST00000590153 570 ntTSL 4 BASIC11.43□□□□□ -0.58
PDE6DO43924 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC11.43□□□□□ -0.58
PDE6DO43924 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC11.43□□□□□ -0.58
PDE6DO43924 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
PDE6DO43924 TXNDC12-201ENST00000371626 2396 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
PDE6DO43924 Z98257.2-202ENST00000641138 1548 ntBASIC11.43□□□□□ -0.58
PDE6DO43924 NIN-206ENST00000453196 6785 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
PDE6DO43924 AL805961.2-201ENST00000642139 4817 ntBASIC11.43□□□□□ -0.58
PDE6DO43924 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
PDE6DO43924 TRHDE-AS1-201ENST00000426250 3684 ntTSL 5 BASIC11.43□□□□□ -0.58
PDE6DO43924 LRRC17-201ENST00000249377 2002 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
PDE6DO43924 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC11.43□□□□□ -0.58
PDE6DO43924 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
PDE6DO43924 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC11.43□□□□□ -0.58
PDE6DO43924 RPUSD4-201ENST00000298317 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
PDE6DO43924 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
PDE6DO43924 DHX38-201ENST00000268482 4608 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
PDE6DO43924 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
PDE6DO43924 TP73-201ENST00000346387 4854 ntTSL 5 BASIC11.43□□□□□ -0.58
PDE6DO43924 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
PDE6DO43924 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
PDE6DO43924 FUT6-205ENST00000527106 2211 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
PDE6DO43924 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
PDE6DO43924 SLC24A4-204ENST00000531433 4531 ntAPPRIS ALT2 TSL 2 BASIC11.43□□□□□ -0.58
PDE6DO43924 CPLX2-201ENST00000359546 5023 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
PDE6DO43924 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
PDE6DO43924 TRABD2B-202ENST00000606738 7034 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
PDE6DO43924 AL358334.2-201ENST00000553648 4714 ntTSL 2 BASIC11.43□□□□□ -0.58
PDE6DO43924 VAMP4-201ENST00000236192 5159 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
PDE6DO43924 SH3PXD2A-203ENST00000369774 11468 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
PDE6DO43924 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
PDE6DO43924 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
PDE6DO43924 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
PDE6DO43924 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC11.42□□□□□ -0.58
PDE6DO43924 SCOC-210ENST00000608372 5129 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
PDE6DO43924 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
PDE6DO43924 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
PDE6DO43924 USO1-201ENST00000264904 4135 ntTSL 2 BASIC11.42□□□□□ -0.58
PDE6DO43924 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC11.42□□□□□ -0.58
PDE6DO43924 POC5-202ENST00000428202 2229 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
PDE6DO43924 ICOSLG-202ENST00000400377 2907 ntTSL 2 BASIC11.42□□□□□ -0.58
PDE6DO43924 PLXNB1-201ENST00000296440 7143 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
PDE6DO43924 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
PDE6DO43924 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
PDE6DO43924 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
PDE6DO43924 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC11.42□□□□□ -0.58
PDE6DO43924 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC11.42□□□□□ -0.58
PDE6DO43924 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC11.42□□□□□ -0.58
PDE6DO43924 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
PDE6DO43924 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC11.42□□□□□ -0.58
PDE6DO43924 FXYD6-202ENST00000524656 1033 ntAPPRIS P2 TSL 3 BASIC11.42□□□□□ -0.58
PDE6DO43924 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC11.42□□□□□ -0.58
PDE6DO43924 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC11.42□□□□□ -0.58
PDE6DO43924 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC11.42□□□□□ -0.58
PDE6DO43924 SLC46A1-207ENST00000612814 6376 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
PDE6DO43924 MIR6069-201ENST00000620069 79 ntBASIC11.42□□□□□ -0.58
PDE6DO43924 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
PDE6DO43924 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC11.42□□□□□ -0.58
PDE6DO43924 CACNA1G-229ENST00000514181 6795 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
PDE6DO43924 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
PDE6DO43924 SERPINI1-201ENST00000295777 1907 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
PDE6DO43924 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC11.42□□□□□ -0.58
PDE6DO43924 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC11.42□□□□□ -0.58
PDE6DO43924 ANKRD52-201ENST00000267116 8688 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
PDE6DO43924 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
PDE6DO43924 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC11.42□□□□□ -0.58
PDE6DO43924 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC11.42□□□□□ -0.58
PDE6DO43924 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
PDE6DO43924 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
PDE6DO43924 CACNB4-210ENST00000539935 8378 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms