Protein–RNA interactions for Protein: Q9UPP1

PHF8, Histone lysine demethylase PHF8, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8Q9UPP1 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PHF8Q9UPP1 MC5R-201ENST00000324750 1319 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
PHF8Q9UPP1 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC19.6■□□□□ 0.73
PHF8Q9UPP1 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PHF8Q9UPP1 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
PHF8Q9UPP1 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
PHF8Q9UPP1 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
PHF8Q9UPP1 KRTAP4-4-201ENST00000390661 1081 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
PHF8Q9UPP1 TPRKB-203ENST00000409716 816 ntTSL 5 BASIC19.6■□□□□ 0.73
PHF8Q9UPP1 BX679664.3-201ENST00000414070 555 ntBASIC19.6■□□□□ 0.73
PHF8Q9UPP1 HTATIP2-202ENST00000421577 886 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
PHF8Q9UPP1 OR51A9P-201ENST00000422578 911 ntBASIC19.6■□□□□ 0.73
PHF8Q9UPP1 AC012497.1-201ENST00000429392 575 ntBASIC19.6■□□□□ 0.73
PHF8Q9UPP1 AL161932.2-201ENST00000435436 679 ntBASIC19.6■□□□□ 0.73
PHF8Q9UPP1 AL355537.2-201ENST00000453367 375 ntTSL 2 BASIC19.6■□□□□ 0.73
PHF8Q9UPP1 AL353150.1-201ENST00000456944 583 ntTSL 2 BASIC19.6■□□□□ 0.73
PHF8Q9UPP1 AC113935.1-201ENST00000471722 555 ntBASIC19.6■□□□□ 0.73
PHF8Q9UPP1 AC008026.2-201ENST00000495438 348 ntBASIC19.6■□□□□ 0.73
PHF8Q9UPP1 AC090136.2-201ENST00000517809 420 ntBASIC19.6■□□□□ 0.73
PHF8Q9UPP1 IMMP1L-202ENST00000526776 469 ntTSL 3 BASIC19.6■□□□□ 0.73
PHF8Q9UPP1 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
PHF8Q9UPP1 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
PHF8Q9UPP1 AC090001.1-201ENST00000553194 467 ntTSL 3 BASIC19.6■□□□□ 0.73
PHF8Q9UPP1 FOXN3-AS2-201ENST00000554071 1262 ntBASIC19.6■□□□□ 0.73
PHF8Q9UPP1 MT2A-202ENST00000561491 581 ntTSL 2 BASIC19.6■□□□□ 0.73
PHF8Q9UPP1 AC130456.3-201ENST00000561762 633 ntTSL 3 BASIC19.6■□□□□ 0.73
PHF8Q9UPP1 ABHD17AP9-201ENST00000561925 548 ntBASIC19.6■□□□□ 0.73
PHF8Q9UPP1 AP005264.5-201ENST00000590066 467 ntBASIC19.6■□□□□ 0.73
PHF8Q9UPP1 AC091769.1-201ENST00000619576 568 ntBASIC19.6■□□□□ 0.73
PHF8Q9UPP1 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC19.6■□□□□ 0.73
PHF8Q9UPP1 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC19.6■□□□□ 0.73
PHF8Q9UPP1 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC19.6■□□□□ 0.73
PHF8Q9UPP1 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC19.6■□□□□ 0.73
PHF8Q9UPP1 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PHF8Q9UPP1 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PHF8Q9UPP1 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC19.6■□□□□ 0.73
PHF8Q9UPP1 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
PHF8Q9UPP1 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
PHF8Q9UPP1 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC19.6■□□□□ 0.73
PHF8Q9UPP1 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
PHF8Q9UPP1 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PHF8Q9UPP1 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PHF8Q9UPP1 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PHF8Q9UPP1 ETNPPL-206ENST00000510706 1692 ntTSL 2 BASIC19.59■□□□□ 0.73
PHF8Q9UPP1 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
PHF8Q9UPP1 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PHF8Q9UPP1 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PHF8Q9UPP1 ZNF226-201ENST00000300823 817 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PHF8Q9UPP1 XPNPEP2-201ENST00000371105 912 ntTSL 2 BASIC19.59■□□□□ 0.73
PHF8Q9UPP1 DIO1-203ENST00000388876 606 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PHF8Q9UPP1 ANG-202ENST00000397990 742 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PHF8Q9UPP1 MIR1301-201ENST00000408518 82 ntBASIC19.59■□□□□ 0.73
PHF8Q9UPP1 AL391832.2-203ENST00000423175 554 ntTSL 3 BASIC19.59■□□□□ 0.73
PHF8Q9UPP1 EMP1-203ENST00000431267 1039 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PHF8Q9UPP1 NMNAT3-213ENST00000512391 794 ntTSL 3 BASIC19.59■□□□□ 0.73
PHF8Q9UPP1 GDNF-207ENST00000515058 764 ntTSL 5 BASIC19.59■□□□□ 0.73
PHF8Q9UPP1 DIO1-204ENST00000524406 626 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PHF8Q9UPP1 DIO1-213ENST00000532493 406 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PHF8Q9UPP1 TGFB3-204ENST00000556285 1280 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PHF8Q9UPP1 AC016266.1-201ENST00000557558 729 ntTSL 3 BASIC19.59■□□□□ 0.73
PHF8Q9UPP1 SORD2P-201ENST00000558556 1069 ntBASIC19.59■□□□□ 0.73
PHF8Q9UPP1 MCEMP1-202ENST00000597445 763 ntAPPRIS ALT2 TSL 3 BASIC19.59■□□□□ 0.73
PHF8Q9UPP1 DGAT2L7P-201ENST00000602462 744 ntBASIC19.59■□□□□ 0.73
PHF8Q9UPP1 AC011451.3-201ENST00000634951 582 ntTSL 3 BASIC19.59■□□□□ 0.73
PHF8Q9UPP1 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC19.59■□□□□ 0.73
PHF8Q9UPP1 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
PHF8Q9UPP1 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PHF8Q9UPP1 RBFOX3-203ENST00000580155 1519 ntAPPRIS P2 TSL 2 BASIC19.59■□□□□ 0.73
PHF8Q9UPP1 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PHF8Q9UPP1 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
PHF8Q9UPP1 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC19.59■□□□□ 0.73
PHF8Q9UPP1 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PHF8Q9UPP1 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PHF8Q9UPP1 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC19.59■□□□□ 0.73
PHF8Q9UPP1 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PHF8Q9UPP1 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
PHF8Q9UPP1 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC19.59■□□□□ 0.73
PHF8Q9UPP1 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
PHF8Q9UPP1 CCT8L1P-201ENST00000465400 1674 ntBASIC19.59■□□□□ 0.73
PHF8Q9UPP1 ODCP-201ENST00000459650 1639 ntBASIC19.58■□□□□ 0.73
PHF8Q9UPP1 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC19.58■□□□□ 0.73
PHF8Q9UPP1 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC19.58■□□□□ 0.73
PHF8Q9UPP1 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PHF8Q9UPP1 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
PHF8Q9UPP1 AC138035.3-201ENST00000622706 2791 ntBASIC19.58■□□□□ 0.73
PHF8Q9UPP1 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
PHF8Q9UPP1 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.73
PHF8Q9UPP1 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PHF8Q9UPP1 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PHF8Q9UPP1 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PHF8Q9UPP1 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PHF8Q9UPP1 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PHF8Q9UPP1 LST1-205ENST00000376089 680 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PHF8Q9UPP1 LST1-206ENST00000376090 689 ntTSL 2 BASIC19.58■□□□□ 0.72
PHF8Q9UPP1 LST1-208ENST00000376093 648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
PHF8Q9UPP1 LST1-209ENST00000376096 565 ntTSL 2 BASIC19.58■□□□□ 0.72
PHF8Q9UPP1 LST1-210ENST00000376099 610 ntTSL 2 BASIC19.58■□□□□ 0.72
PHF8Q9UPP1 CD300LG-203ENST00000377203 1060 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
PHF8Q9UPP1 LST1-212ENST00000396101 459 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PHF8Q9UPP1 CFAP36-203ENST00000403007 759 ntTSL 2 BASIC19.58■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms