Protein–RNA interactions for Protein: Q9UBC3

DNMT3B, DNA (cytosine-5)-methyltransferase 3B, humanhuman

Known RBP Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3BQ9UBC3 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
DNMT3BQ9UBC3 KRT8P31-201ENST00000504812 1408 ntBASIC15.24■□□□□ 0.03
DNMT3BQ9UBC3 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
DNMT3BQ9UBC3 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
DNMT3BQ9UBC3 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
DNMT3BQ9UBC3 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
DNMT3BQ9UBC3 AC023908.3-201ENST00000564211 3047 ntBASIC15.24■□□□□ 0.03
DNMT3BQ9UBC3 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
DNMT3BQ9UBC3 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
DNMT3BQ9UBC3 C8orf49-201ENST00000525043 1968 ntBASIC15.24■□□□□ 0.03
DNMT3BQ9UBC3 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
DNMT3BQ9UBC3 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
DNMT3BQ9UBC3 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
DNMT3BQ9UBC3 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
DNMT3BQ9UBC3 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
DNMT3BQ9UBC3 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
DNMT3BQ9UBC3 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
DNMT3BQ9UBC3 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
DNMT3BQ9UBC3 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
DNMT3BQ9UBC3 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
DNMT3BQ9UBC3 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC15.23■□□□□ 0.03
DNMT3BQ9UBC3 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
DNMT3BQ9UBC3 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
DNMT3BQ9UBC3 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC15.23■□□□□ 0.03
DNMT3BQ9UBC3 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC15.23■□□□□ 0.03
DNMT3BQ9UBC3 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
DNMT3BQ9UBC3 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC15.23■□□□□ 0.03
DNMT3BQ9UBC3 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
DNMT3BQ9UBC3 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC15.23■□□□□ 0.03
DNMT3BQ9UBC3 PFN2-202ENST00000423691 911 ntTSL 2 BASIC15.23■□□□□ 0.03
DNMT3BQ9UBC3 AL627422.1-201ENST00000434104 580 ntBASIC15.23■□□□□ 0.03
DNMT3BQ9UBC3 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC15.23■□□□□ 0.03
DNMT3BQ9UBC3 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC15.23■□□□□ 0.03
DNMT3BQ9UBC3 DUX4L50-201ENST00000455245 715 ntBASIC15.23■□□□□ 0.03
DNMT3BQ9UBC3 IGHVIII-5-2-201ENST00000522505 261 ntBASIC15.23■□□□□ 0.03
DNMT3BQ9UBC3 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
DNMT3BQ9UBC3 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC15.23■□□□□ 0.03
DNMT3BQ9UBC3 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC15.23■□□□□ 0.03
DNMT3BQ9UBC3 RPL17P45-201ENST00000586289 509 ntBASIC15.23■□□□□ 0.03
DNMT3BQ9UBC3 AC007326.1-201ENST00000604539 458 ntBASIC15.23■□□□□ 0.03
DNMT3BQ9UBC3 AC009560.1-201ENST00000620208 434 ntBASIC15.23■□□□□ 0.03
DNMT3BQ9UBC3 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
DNMT3BQ9UBC3 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
DNMT3BQ9UBC3 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC15.23■□□□□ 0.03
DNMT3BQ9UBC3 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC15.23■□□□□ 0.03
DNMT3BQ9UBC3 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
DNMT3BQ9UBC3 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC15.23■□□□□ 0.03
DNMT3BQ9UBC3 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC15.23■□□□□ 0.03
DNMT3BQ9UBC3 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
DNMT3BQ9UBC3 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
DNMT3BQ9UBC3 AJ011931.1-201ENST00000618749 2492 ntBASIC15.23■□□□□ 0.03
DNMT3BQ9UBC3 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
DNMT3BQ9UBC3 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
DNMT3BQ9UBC3 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
DNMT3BQ9UBC3 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
DNMT3BQ9UBC3 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
DNMT3BQ9UBC3 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
DNMT3BQ9UBC3 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
DNMT3BQ9UBC3 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
DNMT3BQ9UBC3 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
DNMT3BQ9UBC3 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
DNMT3BQ9UBC3 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC15.23■□□□□ 0.03
DNMT3BQ9UBC3 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
DNMT3BQ9UBC3 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
DNMT3BQ9UBC3 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
DNMT3BQ9UBC3 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC15.22■□□□□ 0.03
DNMT3BQ9UBC3 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
DNMT3BQ9UBC3 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC15.22■□□□□ 0.03
DNMT3BQ9UBC3 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
DNMT3BQ9UBC3 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
DNMT3BQ9UBC3 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
DNMT3BQ9UBC3 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
DNMT3BQ9UBC3 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
DNMT3BQ9UBC3 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
DNMT3BQ9UBC3 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
DNMT3BQ9UBC3 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC15.22■□□□□ 0.03
DNMT3BQ9UBC3 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC15.22■□□□□ 0.03
DNMT3BQ9UBC3 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
DNMT3BQ9UBC3 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
DNMT3BQ9UBC3 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
DNMT3BQ9UBC3 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
DNMT3BQ9UBC3 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC15.22■□□□□ 0.03
DNMT3BQ9UBC3 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
DNMT3BQ9UBC3 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
DNMT3BQ9UBC3 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC15.22■□□□□ 0.03
DNMT3BQ9UBC3 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC15.22■□□□□ 0.03
DNMT3BQ9UBC3 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
DNMT3BQ9UBC3 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
DNMT3BQ9UBC3 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
DNMT3BQ9UBC3 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC15.22■□□□□ 0.03
DNMT3BQ9UBC3 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC15.22■□□□□ 0.03
DNMT3BQ9UBC3 AL022334.2-201ENST00000610000 484 ntBASIC15.22■□□□□ 0.03
DNMT3BQ9UBC3 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC15.22■□□□□ 0.03
DNMT3BQ9UBC3 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC15.22■□□□□ 0.03
DNMT3BQ9UBC3 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC15.22■□□□□ 0.03
DNMT3BQ9UBC3 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
DNMT3BQ9UBC3 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
DNMT3BQ9UBC3 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC15.22■□□□□ 0.03
DNMT3BQ9UBC3 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
DNMT3BQ9UBC3 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms