Protein–RNA interactions for Protein: Q9P2N7

KLHL13, Kelch-like protein 13, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL13Q9P2N7 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC13.32□□□□□ -0.28
KLHL13Q9P2N7 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC13.32□□□□□ -0.28
KLHL13Q9P2N7 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC13.32□□□□□ -0.28
KLHL13Q9P2N7 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
KLHL13Q9P2N7 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC13.32□□□□□ -0.28
KLHL13Q9P2N7 AP006547.1-201ENST00000563435 692 ntBASIC13.32□□□□□ -0.28
KLHL13Q9P2N7 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC13.32□□□□□ -0.28
KLHL13Q9P2N7 AC073413.1-201ENST00000603927 732 ntBASIC13.32□□□□□ -0.28
KLHL13Q9P2N7 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC13.32□□□□□ -0.28
KLHL13Q9P2N7 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
KLHL13Q9P2N7 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
KLHL13Q9P2N7 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
KLHL13Q9P2N7 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
KLHL13Q9P2N7 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
KLHL13Q9P2N7 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
KLHL13Q9P2N7 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
KLHL13Q9P2N7 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
KLHL13Q9P2N7 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
KLHL13Q9P2N7 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
KLHL13Q9P2N7 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC13.32□□□□□ -0.28
KLHL13Q9P2N7 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
KLHL13Q9P2N7 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
KLHL13Q9P2N7 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
KLHL13Q9P2N7 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC13.32□□□□□ -0.28
KLHL13Q9P2N7 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
KLHL13Q9P2N7 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC13.32□□□□□ -0.28
KLHL13Q9P2N7 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
KLHL13Q9P2N7 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
KLHL13Q9P2N7 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC13.32□□□□□ -0.28
KLHL13Q9P2N7 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
KLHL13Q9P2N7 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
KLHL13Q9P2N7 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
KLHL13Q9P2N7 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC13.31□□□□□ -0.28
KLHL13Q9P2N7 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
KLHL13Q9P2N7 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
KLHL13Q9P2N7 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC13.31□□□□□ -0.28
KLHL13Q9P2N7 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC13.31□□□□□ -0.28
KLHL13Q9P2N7 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
KLHL13Q9P2N7 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
KLHL13Q9P2N7 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
KLHL13Q9P2N7 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
KLHL13Q9P2N7 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
KLHL13Q9P2N7 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
KLHL13Q9P2N7 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
KLHL13Q9P2N7 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
KLHL13Q9P2N7 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC13.31□□□□□ -0.28
KLHL13Q9P2N7 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
KLHL13Q9P2N7 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC13.31□□□□□ -0.28
KLHL13Q9P2N7 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
KLHL13Q9P2N7 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC13.31□□□□□ -0.28
KLHL13Q9P2N7 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
KLHL13Q9P2N7 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
KLHL13Q9P2N7 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
KLHL13Q9P2N7 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC13.31□□□□□ -0.28
KLHL13Q9P2N7 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
KLHL13Q9P2N7 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
KLHL13Q9P2N7 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
KLHL13Q9P2N7 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
KLHL13Q9P2N7 AL136309.1-201ENST00000403917 691 ntBASIC13.31□□□□□ -0.28
KLHL13Q9P2N7 RN7SKP175-201ENST00000408472 289 ntBASIC13.31□□□□□ -0.28
KLHL13Q9P2N7 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
KLHL13Q9P2N7 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
KLHL13Q9P2N7 Z93015.1-201ENST00000451718 390 ntBASIC13.31□□□□□ -0.28
KLHL13Q9P2N7 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC13.31□□□□□ -0.28
KLHL13Q9P2N7 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC13.31□□□□□ -0.28
KLHL13Q9P2N7 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
KLHL13Q9P2N7 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC13.31□□□□□ -0.28
KLHL13Q9P2N7 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC13.31□□□□□ -0.28
KLHL13Q9P2N7 RN7SL560P-201ENST00000577943 264 ntBASIC13.31□□□□□ -0.28
KLHL13Q9P2N7 MIR4741-201ENST00000579822 90 ntBASIC13.31□□□□□ -0.28
KLHL13Q9P2N7 PPY2P-201ENST00000582808 702 ntBASIC13.31□□□□□ -0.28
KLHL13Q9P2N7 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
KLHL13Q9P2N7 EEF1DP1-201ENST00000585891 896 ntBASIC13.31□□□□□ -0.28
KLHL13Q9P2N7 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
KLHL13Q9P2N7 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
KLHL13Q9P2N7 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
KLHL13Q9P2N7 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC13.31□□□□□ -0.28
KLHL13Q9P2N7 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
KLHL13Q9P2N7 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC13.31□□□□□ -0.28
KLHL13Q9P2N7 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
KLHL13Q9P2N7 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
KLHL13Q9P2N7 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
KLHL13Q9P2N7 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
KLHL13Q9P2N7 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC13.31□□□□□ -0.28
KLHL13Q9P2N7 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC13.31□□□□□ -0.28
KLHL13Q9P2N7 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
KLHL13Q9P2N7 FES-203ENST00000394302 2133 ntTSL 5 BASIC13.31□□□□□ -0.28
KLHL13Q9P2N7 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
KLHL13Q9P2N7 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC13.31□□□□□ -0.28
KLHL13Q9P2N7 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC13.31□□□□□ -0.28
KLHL13Q9P2N7 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
KLHL13Q9P2N7 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
KLHL13Q9P2N7 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
KLHL13Q9P2N7 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC13.31□□□□□ -0.28
KLHL13Q9P2N7 AC026748.1-201ENST00000624349 3251 ntBASIC13.31□□□□□ -0.28
KLHL13Q9P2N7 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
KLHL13Q9P2N7 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
KLHL13Q9P2N7 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
KLHL13Q9P2N7 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
KLHL13Q9P2N7 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms