Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 AC011495.1-201ENST00000498085 584 ntBASIC12.3□□□□□ -0.44
LIN7CQ9NUP9 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
LIN7CQ9NUP9 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC12.3□□□□□ -0.44
LIN7CQ9NUP9 AC120045.2-201ENST00000567334 178 ntBASIC12.3□□□□□ -0.44
LIN7CQ9NUP9 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC12.3□□□□□ -0.44
LIN7CQ9NUP9 AC107373.2-201ENST00000607735 490 ntBASIC12.3□□□□□ -0.44
LIN7CQ9NUP9 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC12.3□□□□□ -0.44
LIN7CQ9NUP9 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
LIN7CQ9NUP9 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
LIN7CQ9NUP9 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LIN7CQ9NUP9 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC12.3□□□□□ -0.44
LIN7CQ9NUP9 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
LIN7CQ9NUP9 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC12.3□□□□□ -0.44
LIN7CQ9NUP9 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC12.3□□□□□ -0.44
LIN7CQ9NUP9 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
LIN7CQ9NUP9 TCAM1P-207ENST00000485295 1537 ntBASIC12.3□□□□□ -0.44
LIN7CQ9NUP9 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LIN7CQ9NUP9 AC016397.2-201ENST00000624848 1985 ntBASIC12.3□□□□□ -0.44
LIN7CQ9NUP9 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
LIN7CQ9NUP9 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
LIN7CQ9NUP9 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
LIN7CQ9NUP9 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LIN7CQ9NUP9 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
LIN7CQ9NUP9 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LIN7CQ9NUP9 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LIN7CQ9NUP9 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
LIN7CQ9NUP9 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC12.3□□□□□ -0.44
LIN7CQ9NUP9 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
LIN7CQ9NUP9 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC12.3□□□□□ -0.44
LIN7CQ9NUP9 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
LIN7CQ9NUP9 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LIN7CQ9NUP9 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC12.3□□□□□ -0.44
LIN7CQ9NUP9 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
LIN7CQ9NUP9 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC12.3□□□□□ -0.44
LIN7CQ9NUP9 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
LIN7CQ9NUP9 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC12.3□□□□□ -0.44
LIN7CQ9NUP9 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC12.3□□□□□ -0.44
LIN7CQ9NUP9 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LIN7CQ9NUP9 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC12.29□□□□□ -0.44
LIN7CQ9NUP9 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC12.29□□□□□ -0.44
LIN7CQ9NUP9 INE2-201ENST00000630399 1874 ntBASIC12.29□□□□□ -0.44
LIN7CQ9NUP9 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
LIN7CQ9NUP9 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
LIN7CQ9NUP9 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
LIN7CQ9NUP9 AL138799.1-201ENST00000448213 1675 ntBASIC12.29□□□□□ -0.44
LIN7CQ9NUP9 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC12.29□□□□□ -0.44
LIN7CQ9NUP9 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LIN7CQ9NUP9 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
LIN7CQ9NUP9 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LIN7CQ9NUP9 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LIN7CQ9NUP9 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
LIN7CQ9NUP9 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LIN7CQ9NUP9 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
LIN7CQ9NUP9 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
LIN7CQ9NUP9 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
LIN7CQ9NUP9 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
LIN7CQ9NUP9 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
LIN7CQ9NUP9 EDF1-203ENST00000371649 790 ntTSL 2 BASIC12.29□□□□□ -0.44
LIN7CQ9NUP9 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LIN7CQ9NUP9 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LIN7CQ9NUP9 DGCR5-201ENST00000399539 862 ntBASIC12.29□□□□□ -0.44
LIN7CQ9NUP9 AL035633.1-201ENST00000406139 838 ntBASIC12.29□□□□□ -0.44
LIN7CQ9NUP9 AC098850.1-201ENST00000419919 790 ntBASIC12.29□□□□□ -0.44
LIN7CQ9NUP9 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
LIN7CQ9NUP9 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
LIN7CQ9NUP9 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC12.29□□□□□ -0.44
LIN7CQ9NUP9 RN7SL692P-201ENST00000464677 288 ntBASIC12.29□□□□□ -0.44
LIN7CQ9NUP9 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC12.29□□□□□ -0.44
LIN7CQ9NUP9 NEU3-203ENST00000529024 581 ntTSL 3 BASIC12.29□□□□□ -0.44
LIN7CQ9NUP9 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC12.29□□□□□ -0.44
LIN7CQ9NUP9 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
LIN7CQ9NUP9 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC12.29□□□□□ -0.44
LIN7CQ9NUP9 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC12.29□□□□□ -0.44
LIN7CQ9NUP9 WASH4P-201ENST00000564273 1246 ntBASIC12.29□□□□□ -0.44
LIN7CQ9NUP9 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC12.29□□□□□ -0.44
LIN7CQ9NUP9 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC12.29□□□□□ -0.44
LIN7CQ9NUP9 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
LIN7CQ9NUP9 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC12.29□□□□□ -0.44
LIN7CQ9NUP9 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
LIN7CQ9NUP9 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LIN7CQ9NUP9 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
LIN7CQ9NUP9 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
LIN7CQ9NUP9 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
LIN7CQ9NUP9 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LIN7CQ9NUP9 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LIN7CQ9NUP9 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
LIN7CQ9NUP9 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
LIN7CQ9NUP9 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LIN7CQ9NUP9 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
LIN7CQ9NUP9 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
LIN7CQ9NUP9 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC12.29□□□□□ -0.44
LIN7CQ9NUP9 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC12.29□□□□□ -0.44
LIN7CQ9NUP9 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC12.29□□□□□ -0.44
LIN7CQ9NUP9 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
LIN7CQ9NUP9 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC12.29□□□□□ -0.44
LIN7CQ9NUP9 HNRNPA1P48-201ENST00000562726 1377 ntBASIC12.29□□□□□ -0.44
LIN7CQ9NUP9 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LIN7CQ9NUP9 ZNF275-201ENST00000370249 5920 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LIN7CQ9NUP9 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
LIN7CQ9NUP9 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 170.9 ms