Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
BLOC1S4Q9NUP1 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
BLOC1S4Q9NUP1 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
BLOC1S4Q9NUP1 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
BLOC1S4Q9NUP1 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC16.25■□□□□ 0.19
BLOC1S4Q9NUP1 BANP-203ENST00000393207 2438 ntTSL 2 BASIC16.25■□□□□ 0.19
BLOC1S4Q9NUP1 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
BLOC1S4Q9NUP1 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
BLOC1S4Q9NUP1 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
BLOC1S4Q9NUP1 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC16.25■□□□□ 0.19
BLOC1S4Q9NUP1 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC16.25■□□□□ 0.19
BLOC1S4Q9NUP1 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
BLOC1S4Q9NUP1 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC16.25■□□□□ 0.19
BLOC1S4Q9NUP1 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
BLOC1S4Q9NUP1 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC16.25■□□□□ 0.19
BLOC1S4Q9NUP1 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC16.25■□□□□ 0.19
BLOC1S4Q9NUP1 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC16.25■□□□□ 0.19
BLOC1S4Q9NUP1 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC16.25■□□□□ 0.19
BLOC1S4Q9NUP1 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC16.25■□□□□ 0.19
BLOC1S4Q9NUP1 Six3os1_5.1-201ENST00000611000 271 ntBASIC16.25■□□□□ 0.19
BLOC1S4Q9NUP1 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
BLOC1S4Q9NUP1 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC16.25■□□□□ 0.19
BLOC1S4Q9NUP1 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC16.25■□□□□ 0.19
BLOC1S4Q9NUP1 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
BLOC1S4Q9NUP1 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
BLOC1S4Q9NUP1 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
BLOC1S4Q9NUP1 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
BLOC1S4Q9NUP1 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
BLOC1S4Q9NUP1 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
BLOC1S4Q9NUP1 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
BLOC1S4Q9NUP1 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
BLOC1S4Q9NUP1 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC16.25■□□□□ 0.19
BLOC1S4Q9NUP1 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
BLOC1S4Q9NUP1 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC16.25■□□□□ 0.19
BLOC1S4Q9NUP1 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
BLOC1S4Q9NUP1 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
BLOC1S4Q9NUP1 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
BLOC1S4Q9NUP1 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
BLOC1S4Q9NUP1 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
BLOC1S4Q9NUP1 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
BLOC1S4Q9NUP1 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
BLOC1S4Q9NUP1 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
BLOC1S4Q9NUP1 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
BLOC1S4Q9NUP1 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
BLOC1S4Q9NUP1 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
BLOC1S4Q9NUP1 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
BLOC1S4Q9NUP1 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
BLOC1S4Q9NUP1 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
BLOC1S4Q9NUP1 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
BLOC1S4Q9NUP1 TCAM1P-207ENST00000485295 1537 ntBASIC16.24■□□□□ 0.19
BLOC1S4Q9NUP1 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
BLOC1S4Q9NUP1 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC16.24■□□□□ 0.19
BLOC1S4Q9NUP1 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
BLOC1S4Q9NUP1 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC16.24■□□□□ 0.19
BLOC1S4Q9NUP1 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC16.24■□□□□ 0.19
BLOC1S4Q9NUP1 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
BLOC1S4Q9NUP1 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
BLOC1S4Q9NUP1 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
BLOC1S4Q9NUP1 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
BLOC1S4Q9NUP1 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
BLOC1S4Q9NUP1 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
BLOC1S4Q9NUP1 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
BLOC1S4Q9NUP1 TNN-203ENST00000622870 3719 ntTSL 5 BASIC16.24■□□□□ 0.19
BLOC1S4Q9NUP1 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC16.24■□□□□ 0.19
BLOC1S4Q9NUP1 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC16.24■□□□□ 0.19
BLOC1S4Q9NUP1 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
BLOC1S4Q9NUP1 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
BLOC1S4Q9NUP1 RPF1-202ENST00000370656 724 ntTSL 2 BASIC16.24■□□□□ 0.19
BLOC1S4Q9NUP1 SMS-201ENST00000379404 1174 ntTSL 3 BASIC16.24■□□□□ 0.19
BLOC1S4Q9NUP1 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
BLOC1S4Q9NUP1 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC16.24■□□□□ 0.19
BLOC1S4Q9NUP1 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC16.24■□□□□ 0.19
BLOC1S4Q9NUP1 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
BLOC1S4Q9NUP1 CD74-212ENST00000524315 584 ntTSL 5 BASIC16.24■□□□□ 0.19
BLOC1S4Q9NUP1 RBM8B-201ENST00000555532 525 ntBASIC16.24■□□□□ 0.19
BLOC1S4Q9NUP1 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC16.24■□□□□ 0.19
BLOC1S4Q9NUP1 AC005324.6-201ENST00000587972 613 ntBASIC16.24■□□□□ 0.19
BLOC1S4Q9NUP1 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
BLOC1S4Q9NUP1 RPL35-206ENST00000629845 340 ntTSL 5 BASIC16.24■□□□□ 0.19
BLOC1S4Q9NUP1 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC16.24■□□□□ 0.19
BLOC1S4Q9NUP1 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
BLOC1S4Q9NUP1 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
BLOC1S4Q9NUP1 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
BLOC1S4Q9NUP1 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
BLOC1S4Q9NUP1 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
BLOC1S4Q9NUP1 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC16.24■□□□□ 0.19
BLOC1S4Q9NUP1 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
BLOC1S4Q9NUP1 AC144522.1-201ENST00000625111 1658 ntBASIC16.24■□□□□ 0.19
BLOC1S4Q9NUP1 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC16.24■□□□□ 0.19
BLOC1S4Q9NUP1 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
BLOC1S4Q9NUP1 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
BLOC1S4Q9NUP1 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
BLOC1S4Q9NUP1 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
BLOC1S4Q9NUP1 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
BLOC1S4Q9NUP1 MBLAC2-202ENST00000514906 1936 ntBASIC16.23■□□□□ 0.19
BLOC1S4Q9NUP1 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
BLOC1S4Q9NUP1 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
BLOC1S4Q9NUP1 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
BLOC1S4Q9NUP1 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
BLOC1S4Q9NUP1 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms