Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 AC111170.3-201ENST00000624282 2464 ntBASIC14.08□□□□□ -0.16
CCM2LQ9NUG4 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CCM2LQ9NUG4 AC090643.2-201ENST00000623442 2029 ntBASIC14.08□□□□□ -0.16
CCM2LQ9NUG4 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CCM2LQ9NUG4 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CCM2LQ9NUG4 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC14.08□□□□□ -0.16
CCM2LQ9NUG4 MYADML-201ENST00000474610 2147 ntBASIC14.08□□□□□ -0.16
CCM2LQ9NUG4 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CCM2LQ9NUG4 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
CCM2LQ9NUG4 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC14.08□□□□□ -0.16
CCM2LQ9NUG4 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC14.08□□□□□ -0.16
CCM2LQ9NUG4 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCM2LQ9NUG4 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCM2LQ9NUG4 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCM2LQ9NUG4 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCM2LQ9NUG4 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCM2LQ9NUG4 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC14.07□□□□□ -0.16
CCM2LQ9NUG4 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC14.07□□□□□ -0.16
CCM2LQ9NUG4 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCM2LQ9NUG4 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCM2LQ9NUG4 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC14.07□□□□□ -0.16
CCM2LQ9NUG4 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCM2LQ9NUG4 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
CCM2LQ9NUG4 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCM2LQ9NUG4 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCM2LQ9NUG4 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC14.07□□□□□ -0.16
CCM2LQ9NUG4 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CCM2LQ9NUG4 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CCM2LQ9NUG4 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCM2LQ9NUG4 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCM2LQ9NUG4 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
CCM2LQ9NUG4 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
CCM2LQ9NUG4 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCM2LQ9NUG4 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
CCM2LQ9NUG4 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCM2LQ9NUG4 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
CCM2LQ9NUG4 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCM2LQ9NUG4 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCM2LQ9NUG4 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
CCM2LQ9NUG4 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
CCM2LQ9NUG4 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC14.07□□□□□ -0.16
CCM2LQ9NUG4 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
CCM2LQ9NUG4 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
CCM2LQ9NUG4 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
CCM2LQ9NUG4 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCM2LQ9NUG4 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
CCM2LQ9NUG4 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC14.07□□□□□ -0.16
CCM2LQ9NUG4 CENPM-206ENST00000407253 818 ntTSL 2 BASIC14.07□□□□□ -0.16
CCM2LQ9NUG4 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
CCM2LQ9NUG4 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC14.07□□□□□ -0.16
CCM2LQ9NUG4 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CCM2LQ9NUG4 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC14.07□□□□□ -0.16
CCM2LQ9NUG4 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCM2LQ9NUG4 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC14.07□□□□□ -0.16
CCM2LQ9NUG4 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC14.07□□□□□ -0.16
CCM2LQ9NUG4 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC14.07□□□□□ -0.16
CCM2LQ9NUG4 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC14.07□□□□□ -0.16
CCM2LQ9NUG4 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC14.07□□□□□ -0.16
CCM2LQ9NUG4 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
CCM2LQ9NUG4 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC14.07□□□□□ -0.16
CCM2LQ9NUG4 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCM2LQ9NUG4 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCM2LQ9NUG4 AC004241.5-201ENST00000623870 2448 ntBASIC14.07□□□□□ -0.16
CCM2LQ9NUG4 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC14.07□□□□□ -0.16
CCM2LQ9NUG4 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCM2LQ9NUG4 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCM2LQ9NUG4 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCM2LQ9NUG4 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC14.07□□□□□ -0.16
CCM2LQ9NUG4 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
CCM2LQ9NUG4 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC14.07□□□□□ -0.16
CCM2LQ9NUG4 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCM2LQ9NUG4 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CCM2LQ9NUG4 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCM2LQ9NUG4 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCM2LQ9NUG4 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC14.07□□□□□ -0.16
CCM2LQ9NUG4 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCM2LQ9NUG4 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CCM2LQ9NUG4 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCM2LQ9NUG4 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCM2LQ9NUG4 KRT8P14-201ENST00000414254 1442 ntBASIC14.07□□□□□ -0.16
CCM2LQ9NUG4 GSN-209ENST00000449733 2702 ntTSL 2 BASIC14.06□□□□□ -0.16
CCM2LQ9NUG4 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CCM2LQ9NUG4 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCM2LQ9NUG4 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCM2LQ9NUG4 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCM2LQ9NUG4 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC14.06□□□□□ -0.16
CCM2LQ9NUG4 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CCM2LQ9NUG4 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
CCM2LQ9NUG4 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CCM2LQ9NUG4 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCM2LQ9NUG4 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCM2LQ9NUG4 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC14.06□□□□□ -0.16
CCM2LQ9NUG4 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCM2LQ9NUG4 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCM2LQ9NUG4 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCM2LQ9NUG4 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
CCM2LQ9NUG4 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC14.06□□□□□ -0.16
CCM2LQ9NUG4 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC14.06□□□□□ -0.16
CCM2LQ9NUG4 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
CCM2LQ9NUG4 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 63.1 ms