Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
KIAA1549Q9HCM3 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
KIAA1549Q9HCM3 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
KIAA1549Q9HCM3 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
KIAA1549Q9HCM3 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC12.95□□□□□ -0.34
KIAA1549Q9HCM3 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
KIAA1549Q9HCM3 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
KIAA1549Q9HCM3 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
KIAA1549Q9HCM3 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
KIAA1549Q9HCM3 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
KIAA1549Q9HCM3 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
KIAA1549Q9HCM3 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
KIAA1549Q9HCM3 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
KIAA1549Q9HCM3 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
KIAA1549Q9HCM3 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
KIAA1549Q9HCM3 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
KIAA1549Q9HCM3 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
KIAA1549Q9HCM3 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
KIAA1549Q9HCM3 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC12.95□□□□□ -0.34
KIAA1549Q9HCM3 RN7SL181P-201ENST00000462921 277 ntBASIC12.95□□□□□ -0.34
KIAA1549Q9HCM3 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC12.95□□□□□ -0.34
KIAA1549Q9HCM3 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC12.95□□□□□ -0.34
KIAA1549Q9HCM3 PARP8-218ENST00000513738 596 ntTSL 4 BASIC12.95□□□□□ -0.34
KIAA1549Q9HCM3 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC12.95□□□□□ -0.34
KIAA1549Q9HCM3 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
KIAA1549Q9HCM3 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC12.95□□□□□ -0.34
KIAA1549Q9HCM3 CMC2-204ENST00000562713 573 ntTSL 3 BASIC12.95□□□□□ -0.34
KIAA1549Q9HCM3 CMC2-209ENST00000565108 399 ntTSL 2 BASIC12.95□□□□□ -0.34
KIAA1549Q9HCM3 AC124068.2-201ENST00000569473 1109 ntBASIC12.95□□□□□ -0.34
KIAA1549Q9HCM3 RN7SL190P-201ENST00000582519 257 ntBASIC12.95□□□□□ -0.34
KIAA1549Q9HCM3 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
KIAA1549Q9HCM3 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
KIAA1549Q9HCM3 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC12.95□□□□□ -0.34
KIAA1549Q9HCM3 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
KIAA1549Q9HCM3 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
KIAA1549Q9HCM3 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
KIAA1549Q9HCM3 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
KIAA1549Q9HCM3 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
KIAA1549Q9HCM3 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
KIAA1549Q9HCM3 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
KIAA1549Q9HCM3 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
KIAA1549Q9HCM3 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
KIAA1549Q9HCM3 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC12.95□□□□□ -0.34
KIAA1549Q9HCM3 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC12.95□□□□□ -0.34
KIAA1549Q9HCM3 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC12.95□□□□□ -0.34
KIAA1549Q9HCM3 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
KIAA1549Q9HCM3 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
KIAA1549Q9HCM3 TBC1D3J-201ENST00000620719 1426 ntBASIC12.94□□□□□ -0.34
KIAA1549Q9HCM3 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
KIAA1549Q9HCM3 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
KIAA1549Q9HCM3 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
KIAA1549Q9HCM3 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
KIAA1549Q9HCM3 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
KIAA1549Q9HCM3 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
KIAA1549Q9HCM3 AL035414.1-201ENST00000451327 857 ntBASIC12.94□□□□□ -0.34
KIAA1549Q9HCM3 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC12.94□□□□□ -0.34
KIAA1549Q9HCM3 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC12.94□□□□□ -0.34
KIAA1549Q9HCM3 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
KIAA1549Q9HCM3 MIR5572-201ENST00000583188 137 ntBASIC12.94□□□□□ -0.34
KIAA1549Q9HCM3 HPN-206ENST00000597419 1212 ntTSL 5 BASIC12.94□□□□□ -0.34
KIAA1549Q9HCM3 AC138894.2-201ENST00000602838 371 ntBASIC12.94□□□□□ -0.34
KIAA1549Q9HCM3 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC12.94□□□□□ -0.34
KIAA1549Q9HCM3 NAP1L6-202ENST00000641404 1222 ntBASIC12.94□□□□□ -0.34
KIAA1549Q9HCM3 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
KIAA1549Q9HCM3 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC12.94□□□□□ -0.34
KIAA1549Q9HCM3 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC12.94□□□□□ -0.34
KIAA1549Q9HCM3 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
KIAA1549Q9HCM3 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
KIAA1549Q9HCM3 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
KIAA1549Q9HCM3 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
KIAA1549Q9HCM3 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
KIAA1549Q9HCM3 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC12.94□□□□□ -0.34
KIAA1549Q9HCM3 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
KIAA1549Q9HCM3 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC12.94□□□□□ -0.34
KIAA1549Q9HCM3 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
KIAA1549Q9HCM3 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
KIAA1549Q9HCM3 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
KIAA1549Q9HCM3 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
KIAA1549Q9HCM3 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
KIAA1549Q9HCM3 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
KIAA1549Q9HCM3 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
KIAA1549Q9HCM3 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
KIAA1549Q9HCM3 TKT-201ENST00000296289 1931 ntTSL 5 BASIC12.94□□□□□ -0.34
KIAA1549Q9HCM3 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
KIAA1549Q9HCM3 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
KIAA1549Q9HCM3 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
KIAA1549Q9HCM3 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
KIAA1549Q9HCM3 AC069218.1-201ENST00000435269 762 ntBASIC12.94□□□□□ -0.34
KIAA1549Q9HCM3 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
KIAA1549Q9HCM3 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
KIAA1549Q9HCM3 PGAM1P5-201ENST00000548011 764 ntBASIC12.94□□□□□ -0.34
KIAA1549Q9HCM3 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
KIAA1549Q9HCM3 MIR4754-201ENST00000582477 89 ntBASIC12.94□□□□□ -0.34
KIAA1549Q9HCM3 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
KIAA1549Q9HCM3 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC12.94□□□□□ -0.34
KIAA1549Q9HCM3 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC12.94□□□□□ -0.34
KIAA1549Q9HCM3 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC12.94□□□□□ -0.34
KIAA1549Q9HCM3 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
KIAA1549Q9HCM3 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
KIAA1549Q9HCM3 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC12.94□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms