Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CDH20Q9HBT6 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
CDH20Q9HBT6 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CDH20Q9HBT6 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CDH20Q9HBT6 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CDH20Q9HBT6 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
CDH20Q9HBT6 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC12.93□□□□□ -0.34
CDH20Q9HBT6 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
CDH20Q9HBT6 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC12.93□□□□□ -0.34
CDH20Q9HBT6 CFL1-212ENST00000531413 636 ntTSL 3 BASIC12.93□□□□□ -0.34
CDH20Q9HBT6 NOP2-220ENST00000545915 630 ntTSL 2 BASIC12.93□□□□□ -0.34
CDH20Q9HBT6 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC12.93□□□□□ -0.34
CDH20Q9HBT6 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC12.93□□□□□ -0.34
CDH20Q9HBT6 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC12.93□□□□□ -0.34
CDH20Q9HBT6 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
CDH20Q9HBT6 ZACNP1-201ENST00000612259 710 ntBASIC12.93□□□□□ -0.34
CDH20Q9HBT6 AC008687.7-202ENST00000637404 953 ntBASIC12.93□□□□□ -0.34
CDH20Q9HBT6 AC002472.3-201ENST00000640124 621 ntBASIC12.93□□□□□ -0.34
CDH20Q9HBT6 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC12.93□□□□□ -0.34
CDH20Q9HBT6 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CDH20Q9HBT6 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CDH20Q9HBT6 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CDH20Q9HBT6 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
CDH20Q9HBT6 AP000593.2-201ENST00000542775 1433 ntBASIC12.93□□□□□ -0.34
CDH20Q9HBT6 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
CDH20Q9HBT6 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CDH20Q9HBT6 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CDH20Q9HBT6 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CDH20Q9HBT6 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CDH20Q9HBT6 WDFY2-203ENST00000612477 6932 ntTSL 2 BASIC12.93□□□□□ -0.34
CDH20Q9HBT6 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CDH20Q9HBT6 AC015656.1-201ENST00000624209 3578 ntBASIC12.93□□□□□ -0.34
CDH20Q9HBT6 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CDH20Q9HBT6 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
CDH20Q9HBT6 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
CDH20Q9HBT6 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CDH20Q9HBT6 PLXNB1-201ENST00000296440 7143 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CDH20Q9HBT6 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CDH20Q9HBT6 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CDH20Q9HBT6 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
CDH20Q9HBT6 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CDH20Q9HBT6 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CDH20Q9HBT6 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CDH20Q9HBT6 CAD-202ENST00000403525 6900 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CDH20Q9HBT6 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CDH20Q9HBT6 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
CDH20Q9HBT6 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
CDH20Q9HBT6 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CDH20Q9HBT6 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
CDH20Q9HBT6 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
CDH20Q9HBT6 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC12.92□□□□□ -0.34
CDH20Q9HBT6 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC12.92□□□□□ -0.34
CDH20Q9HBT6 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CDH20Q9HBT6 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CDH20Q9HBT6 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
CDH20Q9HBT6 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
CDH20Q9HBT6 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CDH20Q9HBT6 RN7SKP230-201ENST00000365642 335 ntBASIC12.92□□□□□ -0.34
CDH20Q9HBT6 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CDH20Q9HBT6 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CDH20Q9HBT6 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
CDH20Q9HBT6 RN7SKP175-201ENST00000408472 289 ntBASIC12.92□□□□□ -0.34
CDH20Q9HBT6 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
CDH20Q9HBT6 AC004945.1-201ENST00000416738 983 ntBASIC12.92□□□□□ -0.34
CDH20Q9HBT6 CSF2RBP1-201ENST00000447905 391 ntBASIC12.92□□□□□ -0.34
CDH20Q9HBT6 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CDH20Q9HBT6 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
CDH20Q9HBT6 PPY2P-201ENST00000582808 702 ntBASIC12.92□□□□□ -0.34
CDH20Q9HBT6 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CDH20Q9HBT6 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC12.92□□□□□ -0.34
CDH20Q9HBT6 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
CDH20Q9HBT6 AL359881.2-201ENST00000602973 570 ntBASIC12.92□□□□□ -0.34
CDH20Q9HBT6 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC12.92□□□□□ -0.34
CDH20Q9HBT6 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC12.92□□□□□ -0.34
CDH20Q9HBT6 AC020910.5-201ENST00000623668 1865 ntBASIC12.92□□□□□ -0.34
CDH20Q9HBT6 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CDH20Q9HBT6 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CDH20Q9HBT6 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
CDH20Q9HBT6 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CDH20Q9HBT6 ADAMTS7P1-201ENST00000613213 4793 ntBASIC12.92□□□□□ -0.34
CDH20Q9HBT6 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
CDH20Q9HBT6 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
CDH20Q9HBT6 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
CDH20Q9HBT6 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC12.92□□□□□ -0.34
CDH20Q9HBT6 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CDH20Q9HBT6 AC092135.3-201ENST00000624151 1846 ntBASIC12.92□□□□□ -0.34
CDH20Q9HBT6 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
CDH20Q9HBT6 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CDH20Q9HBT6 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CDH20Q9HBT6 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC12.92□□□□□ -0.34
CDH20Q9HBT6 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC12.92□□□□□ -0.34
CDH20Q9HBT6 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC12.92□□□□□ -0.34
CDH20Q9HBT6 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CDH20Q9HBT6 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CDH20Q9HBT6 TMX4-201ENST00000246024 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CDH20Q9HBT6 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC12.91□□□□□ -0.34
CDH20Q9HBT6 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CDH20Q9HBT6 KRT8P4-201ENST00000509735 1454 ntBASIC12.91□□□□□ -0.34
CDH20Q9HBT6 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CDH20Q9HBT6 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms