Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
KRTAP4-3Q9BYR4 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
KRTAP4-3Q9BYR4 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
KRTAP4-3Q9BYR4 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC4.99□□□□□ -1.61
KRTAP4-3Q9BYR4 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
KRTAP4-3Q9BYR4 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
KRTAP4-3Q9BYR4 FGD5P1-202ENST00000614866 2498 ntBASIC4.99□□□□□ -1.61
KRTAP4-3Q9BYR4 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
KRTAP4-3Q9BYR4 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
KRTAP4-3Q9BYR4 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
KRTAP4-3Q9BYR4 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC4.99□□□□□ -1.61
KRTAP4-3Q9BYR4 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
KRTAP4-3Q9BYR4 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
KRTAP4-3Q9BYR4 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
KRTAP4-3Q9BYR4 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC4.99□□□□□ -1.61
KRTAP4-3Q9BYR4 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
KRTAP4-3Q9BYR4 AL157791.1-201ENST00000553667 1699 ntBASIC4.99□□□□□ -1.61
KRTAP4-3Q9BYR4 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
KRTAP4-3Q9BYR4 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC4.99□□□□□ -1.61
KRTAP4-3Q9BYR4 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC4.99□□□□□ -1.61
KRTAP4-3Q9BYR4 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC4.99□□□□□ -1.61
KRTAP4-3Q9BYR4 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
KRTAP4-3Q9BYR4 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC4.99□□□□□ -1.61
KRTAP4-3Q9BYR4 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC4.99□□□□□ -1.61
KRTAP4-3Q9BYR4 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
KRTAP4-3Q9BYR4 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC4.99□□□□□ -1.61
KRTAP4-3Q9BYR4 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
KRTAP4-3Q9BYR4 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
KRTAP4-3Q9BYR4 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
KRTAP4-3Q9BYR4 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
KRTAP4-3Q9BYR4 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC4.98□□□□□ -1.61
KRTAP4-3Q9BYR4 OVCH1-AS1-204ENST00000641955 5529 ntBASIC4.98□□□□□ -1.61
KRTAP4-3Q9BYR4 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
KRTAP4-3Q9BYR4 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC4.98□□□□□ -1.61
KRTAP4-3Q9BYR4 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC4.98□□□□□ -1.61
KRTAP4-3Q9BYR4 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
KRTAP4-3Q9BYR4 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
KRTAP4-3Q9BYR4 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC4.98□□□□□ -1.61
KRTAP4-3Q9BYR4 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
KRTAP4-3Q9BYR4 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
KRTAP4-3Q9BYR4 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
KRTAP4-3Q9BYR4 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
KRTAP4-3Q9BYR4 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
KRTAP4-3Q9BYR4 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
KRTAP4-3Q9BYR4 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC4.98□□□□□ -1.61
KRTAP4-3Q9BYR4 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
KRTAP4-3Q9BYR4 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC4.98□□□□□ -1.61
KRTAP4-3Q9BYR4 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC4.98□□□□□ -1.61
KRTAP4-3Q9BYR4 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
KRTAP4-3Q9BYR4 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
KRTAP4-3Q9BYR4 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC4.98□□□□□ -1.61
KRTAP4-3Q9BYR4 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
KRTAP4-3Q9BYR4 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
KRTAP4-3Q9BYR4 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
KRTAP4-3Q9BYR4 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
KRTAP4-3Q9BYR4 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
KRTAP4-3Q9BYR4 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
KRTAP4-3Q9BYR4 CICP16-201ENST00000502609 2813 ntBASIC4.98□□□□□ -1.61
KRTAP4-3Q9BYR4 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC4.98□□□□□ -1.61
KRTAP4-3Q9BYR4 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC4.98□□□□□ -1.61
KRTAP4-3Q9BYR4 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
KRTAP4-3Q9BYR4 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
KRTAP4-3Q9BYR4 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC4.98□□□□□ -1.61
KRTAP4-3Q9BYR4 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC4.98□□□□□ -1.61
KRTAP4-3Q9BYR4 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC4.98□□□□□ -1.61
KRTAP4-3Q9BYR4 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
KRTAP4-3Q9BYR4 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
KRTAP4-3Q9BYR4 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
KRTAP4-3Q9BYR4 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
KRTAP4-3Q9BYR4 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC4.98□□□□□ -1.61
KRTAP4-3Q9BYR4 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
KRTAP4-3Q9BYR4 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC4.98□□□□□ -1.61
KRTAP4-3Q9BYR4 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
KRTAP4-3Q9BYR4 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC4.98□□□□□ -1.61
KRTAP4-3Q9BYR4 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
KRTAP4-3Q9BYR4 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
KRTAP4-3Q9BYR4 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
KRTAP4-3Q9BYR4 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC4.98□□□□□ -1.61
KRTAP4-3Q9BYR4 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC4.98□□□□□ -1.61
KRTAP4-3Q9BYR4 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
KRTAP4-3Q9BYR4 AC011498.7-201ENST00000624986 2027 ntBASIC4.98□□□□□ -1.61
KRTAP4-3Q9BYR4 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
KRTAP4-3Q9BYR4 NORAD-201ENST00000565493 5339 ntBASIC4.98□□□□□ -1.61
KRTAP4-3Q9BYR4 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
KRTAP4-3Q9BYR4 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC4.98□□□□□ -1.61
KRTAP4-3Q9BYR4 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
KRTAP4-3Q9BYR4 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
KRTAP4-3Q9BYR4 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC4.98□□□□□ -1.61
KRTAP4-3Q9BYR4 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
KRTAP4-3Q9BYR4 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
KRTAP4-3Q9BYR4 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
KRTAP4-3Q9BYR4 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC4.98□□□□□ -1.61
KRTAP4-3Q9BYR4 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
KRTAP4-3Q9BYR4 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC4.98□□□□□ -1.61
KRTAP4-3Q9BYR4 MIR33B-201ENST00000385104 96 ntBASIC4.98□□□□□ -1.61
KRTAP4-3Q9BYR4 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
KRTAP4-3Q9BYR4 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC4.98□□□□□ -1.61
KRTAP4-3Q9BYR4 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC4.98□□□□□ -1.61
KRTAP4-3Q9BYR4 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC4.98□□□□□ -1.61
KRTAP4-3Q9BYR4 HNRNPA1P27-201ENST00000412087 955 ntBASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms