Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
PCGF1Q9BSM1 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
PCGF1Q9BSM1 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
PCGF1Q9BSM1 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
PCGF1Q9BSM1 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
PCGF1Q9BSM1 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
PCGF1Q9BSM1 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
PCGF1Q9BSM1 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
PCGF1Q9BSM1 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC12.45□□□□□ -0.42
PCGF1Q9BSM1 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
PCGF1Q9BSM1 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
PCGF1Q9BSM1 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
PCGF1Q9BSM1 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
PCGF1Q9BSM1 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
PCGF1Q9BSM1 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
PCGF1Q9BSM1 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
PCGF1Q9BSM1 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
PCGF1Q9BSM1 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
PCGF1Q9BSM1 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
PCGF1Q9BSM1 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC12.45□□□□□ -0.42
PCGF1Q9BSM1 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
PCGF1Q9BSM1 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
PCGF1Q9BSM1 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
PCGF1Q9BSM1 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
PCGF1Q9BSM1 NIN-202ENST00000324330 4364 ntTSL 5 BASIC12.44□□□□□ -0.42
PCGF1Q9BSM1 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
PCGF1Q9BSM1 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
PCGF1Q9BSM1 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
PCGF1Q9BSM1 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
PCGF1Q9BSM1 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
PCGF1Q9BSM1 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC12.44□□□□□ -0.42
PCGF1Q9BSM1 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC12.44□□□□□ -0.42
PCGF1Q9BSM1 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
PCGF1Q9BSM1 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
PCGF1Q9BSM1 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
PCGF1Q9BSM1 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
PCGF1Q9BSM1 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
PCGF1Q9BSM1 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC12.44□□□□□ -0.42
PCGF1Q9BSM1 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC12.44□□□□□ -0.42
PCGF1Q9BSM1 ZEB1-AS1-208ENST00000607166 2503 ntBASIC12.44□□□□□ -0.42
PCGF1Q9BSM1 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC12.44□□□□□ -0.42
PCGF1Q9BSM1 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
PCGF1Q9BSM1 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
PCGF1Q9BSM1 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
PCGF1Q9BSM1 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
PCGF1Q9BSM1 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
PCGF1Q9BSM1 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
PCGF1Q9BSM1 AC006001.1-201ENST00000325130 474 ntBASIC12.44□□□□□ -0.42
PCGF1Q9BSM1 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC12.44□□□□□ -0.42
PCGF1Q9BSM1 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
PCGF1Q9BSM1 AL355994.2-201ENST00000447882 704 ntBASIC12.44□□□□□ -0.42
PCGF1Q9BSM1 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC12.44□□□□□ -0.42
PCGF1Q9BSM1 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC12.44□□□□□ -0.42
PCGF1Q9BSM1 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC12.44□□□□□ -0.42
PCGF1Q9BSM1 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
PCGF1Q9BSM1 AL583810.1-201ENST00000553344 1045 ntBASIC12.44□□□□□ -0.42
PCGF1Q9BSM1 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
PCGF1Q9BSM1 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC12.44□□□□□ -0.42
PCGF1Q9BSM1 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC12.44□□□□□ -0.42
PCGF1Q9BSM1 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC12.44□□□□□ -0.42
PCGF1Q9BSM1 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC12.44□□□□□ -0.42
PCGF1Q9BSM1 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC12.44□□□□□ -0.42
PCGF1Q9BSM1 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC12.44□□□□□ -0.42
PCGF1Q9BSM1 AC008687.7-202ENST00000637404 953 ntBASIC12.44□□□□□ -0.42
PCGF1Q9BSM1 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC12.44□□□□□ -0.42
PCGF1Q9BSM1 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC12.44□□□□□ -0.42
PCGF1Q9BSM1 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
PCGF1Q9BSM1 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
PCGF1Q9BSM1 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
PCGF1Q9BSM1 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
PCGF1Q9BSM1 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
PCGF1Q9BSM1 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
PCGF1Q9BSM1 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC12.44□□□□□ -0.42
PCGF1Q9BSM1 AP000845.1-201ENST00000581677 2131 ntBASIC12.44□□□□□ -0.42
PCGF1Q9BSM1 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
PCGF1Q9BSM1 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
PCGF1Q9BSM1 AMT-204ENST00000427987 1646 ntTSL 5 BASIC12.44□□□□□ -0.42
PCGF1Q9BSM1 AJ011931.1-201ENST00000618749 2492 ntBASIC12.44□□□□□ -0.42
PCGF1Q9BSM1 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC12.44□□□□□ -0.42
PCGF1Q9BSM1 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
PCGF1Q9BSM1 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC12.43□□□□□ -0.42
PCGF1Q9BSM1 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
PCGF1Q9BSM1 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
PCGF1Q9BSM1 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
PCGF1Q9BSM1 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
PCGF1Q9BSM1 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
PCGF1Q9BSM1 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
PCGF1Q9BSM1 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC12.43□□□□□ -0.42
PCGF1Q9BSM1 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
PCGF1Q9BSM1 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
PCGF1Q9BSM1 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
PCGF1Q9BSM1 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
PCGF1Q9BSM1 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
PCGF1Q9BSM1 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
PCGF1Q9BSM1 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
PCGF1Q9BSM1 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC12.43□□□□□ -0.42
PCGF1Q9BSM1 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
PCGF1Q9BSM1 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
PCGF1Q9BSM1 TPO-206ENST00000382269 1155 ntTSL 5 BASIC12.43□□□□□ -0.42
PCGF1Q9BSM1 B9D1-203ENST00000395615 805 ntTSL 3 BASIC12.43□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms