Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC14.48□□□□□ -0.09
NPAS2Q99743 AC000095.1-201ENST00000603208 874 ntBASIC14.48□□□□□ -0.09
NPAS2Q99743 AL162274.1-201ENST00000617191 1098 ntBASIC14.48□□□□□ -0.09
NPAS2Q99743 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC14.48□□□□□ -0.09
NPAS2Q99743 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC14.48□□□□□ -0.09
NPAS2Q99743 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
NPAS2Q99743 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NPAS2Q99743 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
NPAS2Q99743 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
NPAS2Q99743 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NPAS2Q99743 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC14.48□□□□□ -0.09
NPAS2Q99743 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
NPAS2Q99743 ABR-205ENST00000544583 5595 ntTSL 2 BASIC14.48□□□□□ -0.09
NPAS2Q99743 PPT1-213ENST00000641319 2388 ntBASIC14.48□□□□□ -0.09
NPAS2Q99743 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
NPAS2Q99743 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
NPAS2Q99743 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NPAS2Q99743 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC14.48□□□□□ -0.09
NPAS2Q99743 INE2-201ENST00000630399 1874 ntBASIC14.48□□□□□ -0.09
NPAS2Q99743 GALC-206ENST00000544807 2528 ntTSL 2 BASIC14.48□□□□□ -0.09
NPAS2Q99743 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
NPAS2Q99743 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
NPAS2Q99743 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
NPAS2Q99743 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC14.48□□□□□ -0.09
NPAS2Q99743 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC14.48□□□□□ -0.09
NPAS2Q99743 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
NPAS2Q99743 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC14.47□□□□□ -0.09
NPAS2Q99743 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NPAS2Q99743 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC14.47□□□□□ -0.09
NPAS2Q99743 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
NPAS2Q99743 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC14.47□□□□□ -0.09
NPAS2Q99743 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NPAS2Q99743 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC14.47□□□□□ -0.09
NPAS2Q99743 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NPAS2Q99743 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC14.47□□□□□ -0.09
NPAS2Q99743 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC14.47□□□□□ -0.09
NPAS2Q99743 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NPAS2Q99743 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC14.47□□□□□ -0.09
NPAS2Q99743 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NPAS2Q99743 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
NPAS2Q99743 AL137783.1-201ENST00000623494 1896 ntBASIC14.47□□□□□ -0.09
NPAS2Q99743 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
NPAS2Q99743 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC14.47□□□□□ -0.09
NPAS2Q99743 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC14.47□□□□□ -0.09
NPAS2Q99743 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NPAS2Q99743 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NPAS2Q99743 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
NPAS2Q99743 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
NPAS2Q99743 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NPAS2Q99743 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC14.47□□□□□ -0.09
NPAS2Q99743 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC14.47□□□□□ -0.09
NPAS2Q99743 NEU3-203ENST00000529024 581 ntTSL 3 BASIC14.47□□□□□ -0.09
NPAS2Q99743 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC14.47□□□□□ -0.09
NPAS2Q99743 AC124283.3-201ENST00000570869 594 ntBASIC14.47□□□□□ -0.09
NPAS2Q99743 GPX4-206ENST00000588919 803 ntTSL 2 BASIC14.47□□□□□ -0.09
NPAS2Q99743 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
NPAS2Q99743 AC008735.3-201ENST00000596646 500 ntBASIC14.47□□□□□ -0.09
NPAS2Q99743 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
NPAS2Q99743 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC14.47□□□□□ -0.09
NPAS2Q99743 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NPAS2Q99743 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC14.47□□□□□ -0.09
NPAS2Q99743 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
NPAS2Q99743 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
NPAS2Q99743 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NPAS2Q99743 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
NPAS2Q99743 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NPAS2Q99743 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NPAS2Q99743 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC14.47□□□□□ -0.09
NPAS2Q99743 KRT8P24-201ENST00000560290 1559 ntBASIC14.47□□□□□ -0.09
NPAS2Q99743 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
NPAS2Q99743 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC14.47□□□□□ -0.09
NPAS2Q99743 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NPAS2Q99743 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC14.47□□□□□ -0.09
NPAS2Q99743 HNRNPA1P48-201ENST00000562726 1377 ntBASIC14.47□□□□□ -0.09
NPAS2Q99743 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NPAS2Q99743 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
NPAS2Q99743 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
NPAS2Q99743 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
NPAS2Q99743 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC14.46□□□□□ -0.09
NPAS2Q99743 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC14.46□□□□□ -0.09
NPAS2Q99743 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
NPAS2Q99743 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
NPAS2Q99743 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
NPAS2Q99743 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
NPAS2Q99743 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NPAS2Q99743 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
NPAS2Q99743 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NPAS2Q99743 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NPAS2Q99743 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NPAS2Q99743 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
NPAS2Q99743 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
NPAS2Q99743 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
NPAS2Q99743 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC14.46□□□□□ -0.09
NPAS2Q99743 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
NPAS2Q99743 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
NPAS2Q99743 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
NPAS2Q99743 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
NPAS2Q99743 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NPAS2Q99743 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NPAS2Q99743 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms