Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 GPER1-207ENST00000619052 571 ntTSL 2 BASIC11.99□□□□□ -0.49
RAB40CQ96S21 AC009093.7-201ENST00000623853 1223 ntBASIC11.99□□□□□ -0.49
RAB40CQ96S21 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
RAB40CQ96S21 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
RAB40CQ96S21 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
RAB40CQ96S21 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC11.99□□□□□ -0.49
RAB40CQ96S21 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC11.99□□□□□ -0.49
RAB40CQ96S21 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
RAB40CQ96S21 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC11.99□□□□□ -0.49
RAB40CQ96S21 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC11.99□□□□□ -0.49
RAB40CQ96S21 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
RAB40CQ96S21 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
RAB40CQ96S21 OLFML2A-203ENST00000373580 6425 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
RAB40CQ96S21 NUTM2HP-201ENST00000442076 2498 ntBASIC11.99□□□□□ -0.49
RAB40CQ96S21 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
RAB40CQ96S21 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC11.99□□□□□ -0.49
RAB40CQ96S21 AC114271.1-201ENST00000612689 2813 ntBASIC11.99□□□□□ -0.49
RAB40CQ96S21 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
RAB40CQ96S21 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC11.99□□□□□ -0.49
RAB40CQ96S21 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
RAB40CQ96S21 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC11.99□□□□□ -0.49
RAB40CQ96S21 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
RAB40CQ96S21 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
RAB40CQ96S21 MEX3B-202ENST00000558133 4333 ntBASIC11.98□□□□□ -0.49
RAB40CQ96S21 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
RAB40CQ96S21 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC11.98□□□□□ -0.49
RAB40CQ96S21 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
RAB40CQ96S21 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
RAB40CQ96S21 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
RAB40CQ96S21 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
RAB40CQ96S21 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
RAB40CQ96S21 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC11.98□□□□□ -0.49
RAB40CQ96S21 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC11.98□□□□□ -0.49
RAB40CQ96S21 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
RAB40CQ96S21 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
RAB40CQ96S21 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC11.98□□□□□ -0.49
RAB40CQ96S21 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
RAB40CQ96S21 RERG-209ENST00000546331 1383 ntTSL 2 BASIC11.98□□□□□ -0.49
RAB40CQ96S21 AL136172.1-201ENST00000598590 1394 ntBASIC11.98□□□□□ -0.49
RAB40CQ96S21 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
RAB40CQ96S21 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
RAB40CQ96S21 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
RAB40CQ96S21 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC11.98□□□□□ -0.49
RAB40CQ96S21 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
RAB40CQ96S21 RPL30-202ENST00000396070 440 ntTSL 2 BASIC11.98□□□□□ -0.49
RAB40CQ96S21 RAD18-204ENST00000418463 563 ntTSL 4 BASIC11.98□□□□□ -0.49
RAB40CQ96S21 RAD18-205ENST00000421052 582 ntTSL 3 BASIC11.98□□□□□ -0.49
RAB40CQ96S21 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC11.98□□□□□ -0.49
RAB40CQ96S21 GPS2P2-201ENST00000430745 888 ntBASIC11.98□□□□□ -0.49
RAB40CQ96S21 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC11.98□□□□□ -0.49
RAB40CQ96S21 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
RAB40CQ96S21 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
RAB40CQ96S21 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
RAB40CQ96S21 SATB1-217ENST00000493952 626 ntTSL 3 BASIC11.98□□□□□ -0.49
RAB40CQ96S21 GLI4-203ENST00000517468 963 ntTSL 5 BASIC11.98□□□□□ -0.49
RAB40CQ96S21 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC11.98□□□□□ -0.49
RAB40CQ96S21 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
RAB40CQ96S21 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC11.98□□□□□ -0.49
RAB40CQ96S21 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC11.98□□□□□ -0.49
RAB40CQ96S21 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
RAB40CQ96S21 RAB34-224ENST00000636513 888 ntTSL 5 BASIC11.98□□□□□ -0.49
RAB40CQ96S21 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
RAB40CQ96S21 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
RAB40CQ96S21 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
RAB40CQ96S21 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
RAB40CQ96S21 MON1B-201ENST00000248248 6091 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
RAB40CQ96S21 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC11.98□□□□□ -0.49
RAB40CQ96S21 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC11.98□□□□□ -0.49
RAB40CQ96S21 PKP1-203ENST00000367324 5384 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
RAB40CQ96S21 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC11.98□□□□□ -0.49
RAB40CQ96S21 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
RAB40CQ96S21 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
RAB40CQ96S21 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC11.98□□□□□ -0.49
RAB40CQ96S21 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC11.98□□□□□ -0.49
RAB40CQ96S21 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
RAB40CQ96S21 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
RAB40CQ96S21 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC11.98□□□□□ -0.49
RAB40CQ96S21 HECTD2-201ENST00000298068 4802 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
RAB40CQ96S21 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
RAB40CQ96S21 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC11.98□□□□□ -0.49
RAB40CQ96S21 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
RAB40CQ96S21 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC11.98□□□□□ -0.49
RAB40CQ96S21 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
RAB40CQ96S21 AC068760.1-201ENST00000493579 1953 ntBASIC11.98□□□□□ -0.49
RAB40CQ96S21 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
RAB40CQ96S21 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
RAB40CQ96S21 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
RAB40CQ96S21 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
RAB40CQ96S21 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
RAB40CQ96S21 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
RAB40CQ96S21 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
RAB40CQ96S21 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
RAB40CQ96S21 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC11.97□□□□□ -0.49
RAB40CQ96S21 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC11.97□□□□□ -0.49
RAB40CQ96S21 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC11.97□□□□□ -0.49
RAB40CQ96S21 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC11.97□□□□□ -0.49
RAB40CQ96S21 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
RAB40CQ96S21 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
RAB40CQ96S21 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC11.97□□□□□ -0.49
RAB40CQ96S21 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 160.4 ms