Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC13.9□□□□□ -0.18
NR1H4Q96RI1 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
NR1H4Q96RI1 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC13.9□□□□□ -0.18
NR1H4Q96RI1 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC13.9□□□□□ -0.18
NR1H4Q96RI1 TMC8-201ENST00000318430 4411 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
NR1H4Q96RI1 HK2-201ENST00000290573 5772 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NR1H4Q96RI1 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
NR1H4Q96RI1 MYADML-201ENST00000474610 2147 ntBASIC13.9□□□□□ -0.18
NR1H4Q96RI1 TMC5-204ENST00000541464 3581 ntTSL 2 BASIC13.9□□□□□ -0.18
NR1H4Q96RI1 NIN-206ENST00000453196 6785 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
NR1H4Q96RI1 CARS-214ENST00000529772 2637 ntTSL 2 BASIC13.9□□□□□ -0.18
NR1H4Q96RI1 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
NR1H4Q96RI1 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
NR1H4Q96RI1 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
NR1H4Q96RI1 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
NR1H4Q96RI1 CSF3-203ENST00000394148 622 ntTSL 3 BASIC13.9□□□□□ -0.18
NR1H4Q96RI1 AL450487.1-201ENST00000426799 995 ntBASIC13.9□□□□□ -0.18
NR1H4Q96RI1 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
NR1H4Q96RI1 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
NR1H4Q96RI1 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC13.9□□□□□ -0.18
NR1H4Q96RI1 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC13.9□□□□□ -0.18
NR1H4Q96RI1 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC13.9□□□□□ -0.18
NR1H4Q96RI1 CD63-210ENST00000550776 870 ntTSL 5 BASIC13.9□□□□□ -0.18
NR1H4Q96RI1 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC13.9□□□□□ -0.18
NR1H4Q96RI1 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC13.9□□□□□ -0.18
NR1H4Q96RI1 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC13.9□□□□□ -0.18
NR1H4Q96RI1 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC13.9□□□□□ -0.18
NR1H4Q96RI1 MIR7706-201ENST00000613747 67 ntBASIC13.9□□□□□ -0.18
NR1H4Q96RI1 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC13.9□□□□□ -0.18
NR1H4Q96RI1 PTPRK-204ENST00000368210 5025 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
NR1H4Q96RI1 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
NR1H4Q96RI1 IFT172-203ENST00000416524 1982 ntTSL 2 BASIC13.9□□□□□ -0.18
NR1H4Q96RI1 TRIM40-207ENST00000396581 2086 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
NR1H4Q96RI1 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC13.9□□□□□ -0.18
NR1H4Q96RI1 KRT42P-202ENST00000438131 2895 ntTSL 2 BASIC13.9□□□□□ -0.18
NR1H4Q96RI1 ABI1-213ENST00000536334 3380 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
NR1H4Q96RI1 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
NR1H4Q96RI1 PPP1R15B-201ENST00000367188 5227 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NR1H4Q96RI1 AL008727.1-201ENST00000564460 4728 ntTSL 2 BASIC13.9□□□□□ -0.18
NR1H4Q96RI1 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
NR1H4Q96RI1 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC13.9□□□□□ -0.18
NR1H4Q96RI1 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NR1H4Q96RI1 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NR1H4Q96RI1 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
NR1H4Q96RI1 AC144450.1-201ENST00000366424 1641 ntTSL 2 BASIC13.9□□□□□ -0.19
NR1H4Q96RI1 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC13.9□□□□□ -0.19
NR1H4Q96RI1 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC13.9□□□□□ -0.19
NR1H4Q96RI1 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
NR1H4Q96RI1 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
NR1H4Q96RI1 KRT8P35-201ENST00000483942 1338 ntBASIC13.9□□□□□ -0.19
NR1H4Q96RI1 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
NR1H4Q96RI1 PLA2G6-202ENST00000335539 3060 ntTSL 5 BASIC13.89□□□□□ -0.19
NR1H4Q96RI1 TBX3-202ENST00000349155 4723 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NR1H4Q96RI1 KLHL13-209ENST00000545703 3322 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NR1H4Q96RI1 RBM10-202ENST00000345781 3108 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
NR1H4Q96RI1 FGF10-AS1-201ENST00000502457 1894 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NR1H4Q96RI1 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC13.89□□□□□ -0.19
NR1H4Q96RI1 SLX4-201ENST00000294008 7307 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
NR1H4Q96RI1 ZNF419-202ENST00000347466 3654 ntAPPRIS P3 TSL 2 BASIC13.89□□□□□ -0.19
NR1H4Q96RI1 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NR1H4Q96RI1 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NR1H4Q96RI1 ADCY4-202ENST00000418030 3353 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NR1H4Q96RI1 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NR1H4Q96RI1 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC13.89□□□□□ -0.19
NR1H4Q96RI1 SFTPA1-202ENST00000419470 2210 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NR1H4Q96RI1 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
NR1H4Q96RI1 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
NR1H4Q96RI1 CTCFL-208ENST00000432255 2955 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NR1H4Q96RI1 FAAHP1-202ENST00000446499 1238 ntBASIC13.89□□□□□ -0.19
NR1H4Q96RI1 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC13.89□□□□□ -0.19
NR1H4Q96RI1 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC13.89□□□□□ -0.19
NR1H4Q96RI1 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NR1H4Q96RI1 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
NR1H4Q96RI1 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC13.89□□□□□ -0.19
NR1H4Q96RI1 PP7080-204ENST00000510714 601 ntTSL 3 BASIC13.89□□□□□ -0.19
NR1H4Q96RI1 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC13.89□□□□□ -0.19
NR1H4Q96RI1 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC13.89□□□□□ -0.19
NR1H4Q96RI1 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC13.89□□□□□ -0.19
NR1H4Q96RI1 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC13.89□□□□□ -0.19
NR1H4Q96RI1 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NR1H4Q96RI1 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC13.89□□□□□ -0.19
NR1H4Q96RI1 CACNA1G-209ENST00000502264 6921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
NR1H4Q96RI1 CACNA1G-221ENST00000510115 6912 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
NR1H4Q96RI1 ARNTL-202ENST00000401424 2788 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NR1H4Q96RI1 TMEM131L-202ENST00000409663 5017 ntAPPRIS P3 TSL 5 BASIC13.89□□□□□ -0.19
NR1H4Q96RI1 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC13.89□□□□□ -0.19
NR1H4Q96RI1 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
NR1H4Q96RI1 ARAF-203ENST00000377045 2458 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
NR1H4Q96RI1 MARK2P9-201ENST00000430958 1727 ntBASIC13.89□□□□□ -0.19
NR1H4Q96RI1 SLC46A1-207ENST00000612814 6376 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
NR1H4Q96RI1 HTR5A-201ENST00000287907 2912 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NR1H4Q96RI1 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
NR1H4Q96RI1 AC060814.4-201ENST00000594169 2163 ntBASIC13.89□□□□□ -0.19
NR1H4Q96RI1 AGGF1P10-201ENST00000635005 2191 ntBASIC13.89□□□□□ -0.19
NR1H4Q96RI1 LINC01019-201ENST00000505443 3199 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NR1H4Q96RI1 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC13.89□□□□□ -0.19
NR1H4Q96RI1 KCNN1-201ENST00000222249 3625 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
NR1H4Q96RI1 EIF3A-201ENST00000369144 6646 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NR1H4Q96RI1 MTMR11-201ENST00000369140 2324 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
NR1H4Q96RI1 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms