Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC11.21□□□□□ -0.61
AP1S3Q96PC3 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
AP1S3Q96PC3 TACC1-201ENST00000276520 6513 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
AP1S3Q96PC3 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
AP1S3Q96PC3 SORL1-201ENST00000260197 10904 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
AP1S3Q96PC3 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC11.21□□□□□ -0.61
AP1S3Q96PC3 UXT-AS1-201ENST00000590504 1525 ntBASIC11.21□□□□□ -0.61
AP1S3Q96PC3 OXR1-202ENST00000312046 4406 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
AP1S3Q96PC3 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
AP1S3Q96PC3 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
AP1S3Q96PC3 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC11.21□□□□□ -0.61
AP1S3Q96PC3 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
AP1S3Q96PC3 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
AP1S3Q96PC3 C5orf56-206ENST00000612967 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
AP1S3Q96PC3 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC11.21□□□□□ -0.61
AP1S3Q96PC3 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
AP1S3Q96PC3 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
AP1S3Q96PC3 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
AP1S3Q96PC3 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
AP1S3Q96PC3 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
AP1S3Q96PC3 FO393414.2-201ENST00000405153 598 ntBASIC11.21□□□□□ -0.61
AP1S3Q96PC3 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
AP1S3Q96PC3 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC11.21□□□□□ -0.61
AP1S3Q96PC3 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC11.21□□□□□ -0.61
AP1S3Q96PC3 FAM58CP-201ENST00000435741 640 ntBASIC11.21□□□□□ -0.61
AP1S3Q96PC3 SPCS2P4-201ENST00000436160 681 ntBASIC11.21□□□□□ -0.61
AP1S3Q96PC3 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
AP1S3Q96PC3 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC11.21□□□□□ -0.61
AP1S3Q96PC3 AL591424.1-201ENST00000442569 1213 ntBASIC11.21□□□□□ -0.61
AP1S3Q96PC3 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC11.21□□□□□ -0.61
AP1S3Q96PC3 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC11.21□□□□□ -0.61
AP1S3Q96PC3 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC11.21□□□□□ -0.61
AP1S3Q96PC3 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC11.21□□□□□ -0.61
AP1S3Q96PC3 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC11.21□□□□□ -0.61
AP1S3Q96PC3 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
AP1S3Q96PC3 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC11.21□□□□□ -0.61
AP1S3Q96PC3 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC11.21□□□□□ -0.61
AP1S3Q96PC3 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
AP1S3Q96PC3 RARRES2P9-201ENST00000565168 469 ntBASIC11.21□□□□□ -0.61
AP1S3Q96PC3 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC11.21□□□□□ -0.61
AP1S3Q96PC3 AC026120.1-201ENST00000611536 926 ntBASIC11.21□□□□□ -0.61
AP1S3Q96PC3 AC055717.3-201ENST00000622967 595 ntBASIC11.21□□□□□ -0.61
AP1S3Q96PC3 DNAH10OS-201ENST00000514254 5040 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
AP1S3Q96PC3 RNF24-201ENST00000336095 7453 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
AP1S3Q96PC3 RBM20-201ENST00000369519 7233 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
AP1S3Q96PC3 TOE1-201ENST00000372090 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
AP1S3Q96PC3 MTHFR-210ENST00000641407 2387 ntBASIC11.21□□□□□ -0.62
AP1S3Q96PC3 OS9-206ENST00000435406 2346 ntTSL 2 BASIC11.21□□□□□ -0.62
AP1S3Q96PC3 AC015909.5-201ENST00000624336 2266 ntBASIC11.21□□□□□ -0.62
AP1S3Q96PC3 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
AP1S3Q96PC3 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.62
AP1S3Q96PC3 RUBCNL-201ENST00000378781 3322 ntAPPRIS ALT2 TSL 2 BASIC11.21□□□□□ -0.62
AP1S3Q96PC3 TNS3-201ENST00000311160 7618 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
AP1S3Q96PC3 ZNF23-203ENST00000393539 3242 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
AP1S3Q96PC3 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
AP1S3Q96PC3 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC11.21□□□□□ -0.62
AP1S3Q96PC3 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
AP1S3Q96PC3 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
AP1S3Q96PC3 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC11.21□□□□□ -0.62
AP1S3Q96PC3 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
AP1S3Q96PC3 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
AP1S3Q96PC3 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC11.21□□□□□ -0.62
AP1S3Q96PC3 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC11.21□□□□□ -0.62
AP1S3Q96PC3 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC11.21□□□□□ -0.62
AP1S3Q96PC3 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
AP1S3Q96PC3 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC11.21□□□□□ -0.62
AP1S3Q96PC3 PKN2-203ENST00000370521 6121 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
AP1S3Q96PC3 PRICKLE1-216ENST00000640132 4278 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.62
AP1S3Q96PC3 DNM1P41-201ENST00000623634 3350 ntBASIC11.2□□□□□ -0.62
AP1S3Q96PC3 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
AP1S3Q96PC3 SLC5A8-201ENST00000536262 4178 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
AP1S3Q96PC3 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC11.2□□□□□ -0.62
AP1S3Q96PC3 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
AP1S3Q96PC3 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC11.2□□□□□ -0.62
AP1S3Q96PC3 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC11.2□□□□□ -0.62
AP1S3Q96PC3 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
AP1S3Q96PC3 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
AP1S3Q96PC3 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC11.2□□□□□ -0.62
AP1S3Q96PC3 RBSN-207ENST00000476527 3005 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
AP1S3Q96PC3 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
AP1S3Q96PC3 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
AP1S3Q96PC3 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
AP1S3Q96PC3 DPY19L1-201ENST00000310974 4870 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
AP1S3Q96PC3 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC11.2□□□□□ -0.62
AP1S3Q96PC3 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
AP1S3Q96PC3 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
AP1S3Q96PC3 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
AP1S3Q96PC3 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
AP1S3Q96PC3 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
AP1S3Q96PC3 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC11.2□□□□□ -0.62
AP1S3Q96PC3 SACS-202ENST00000402364 15134 ntTSL 2 BASIC11.2□□□□□ -0.62
AP1S3Q96PC3 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC11.2□□□□□ -0.62
AP1S3Q96PC3 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
AP1S3Q96PC3 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
AP1S3Q96PC3 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
AP1S3Q96PC3 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
AP1S3Q96PC3 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
AP1S3Q96PC3 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
AP1S3Q96PC3 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
AP1S3Q96PC3 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms