Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
DNAAF1Q8NEP3 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC13.04□□□□□ -0.32
DNAAF1Q8NEP3 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC13.04□□□□□ -0.32
DNAAF1Q8NEP3 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC13.04□□□□□ -0.32
DNAAF1Q8NEP3 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
DNAAF1Q8NEP3 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC13.04□□□□□ -0.32
DNAAF1Q8NEP3 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
DNAAF1Q8NEP3 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC13.04□□□□□ -0.32
DNAAF1Q8NEP3 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC13.04□□□□□ -0.32
DNAAF1Q8NEP3 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
DNAAF1Q8NEP3 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
DNAAF1Q8NEP3 INE2-201ENST00000630399 1874 ntBASIC13.04□□□□□ -0.32
DNAAF1Q8NEP3 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
DNAAF1Q8NEP3 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
DNAAF1Q8NEP3 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
DNAAF1Q8NEP3 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
DNAAF1Q8NEP3 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
DNAAF1Q8NEP3 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
DNAAF1Q8NEP3 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
DNAAF1Q8NEP3 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
DNAAF1Q8NEP3 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC13.03□□□□□ -0.32
DNAAF1Q8NEP3 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC13.03□□□□□ -0.32
DNAAF1Q8NEP3 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC13.03□□□□□ -0.32
DNAAF1Q8NEP3 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
DNAAF1Q8NEP3 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
DNAAF1Q8NEP3 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
DNAAF1Q8NEP3 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC13.03□□□□□ -0.32
DNAAF1Q8NEP3 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
DNAAF1Q8NEP3 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
DNAAF1Q8NEP3 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
DNAAF1Q8NEP3 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
DNAAF1Q8NEP3 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC13.03□□□□□ -0.32
DNAAF1Q8NEP3 AL138799.1-201ENST00000448213 1675 ntBASIC13.03□□□□□ -0.32
DNAAF1Q8NEP3 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
DNAAF1Q8NEP3 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
DNAAF1Q8NEP3 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
DNAAF1Q8NEP3 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
DNAAF1Q8NEP3 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
DNAAF1Q8NEP3 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
DNAAF1Q8NEP3 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
DNAAF1Q8NEP3 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
DNAAF1Q8NEP3 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
DNAAF1Q8NEP3 LINC00384-201ENST00000437721 6852 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
DNAAF1Q8NEP3 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
DNAAF1Q8NEP3 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
DNAAF1Q8NEP3 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC13.03□□□□□ -0.32
DNAAF1Q8NEP3 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC13.03□□□□□ -0.32
DNAAF1Q8NEP3 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
DNAAF1Q8NEP3 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC13.03□□□□□ -0.32
DNAAF1Q8NEP3 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC13.03□□□□□ -0.32
DNAAF1Q8NEP3 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC13.03□□□□□ -0.32
DNAAF1Q8NEP3 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC13.03□□□□□ -0.32
DNAAF1Q8NEP3 AC093813.1-201ENST00000605066 256 ntBASIC13.03□□□□□ -0.32
DNAAF1Q8NEP3 AL390754.1-201ENST00000619088 582 ntBASIC13.03□□□□□ -0.32
DNAAF1Q8NEP3 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
DNAAF1Q8NEP3 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
DNAAF1Q8NEP3 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC13.03□□□□□ -0.32
DNAAF1Q8NEP3 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC13.03□□□□□ -0.32
DNAAF1Q8NEP3 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
DNAAF1Q8NEP3 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
DNAAF1Q8NEP3 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
DNAAF1Q8NEP3 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC13.03□□□□□ -0.32
DNAAF1Q8NEP3 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
DNAAF1Q8NEP3 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
DNAAF1Q8NEP3 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
DNAAF1Q8NEP3 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
DNAAF1Q8NEP3 KRT8P22-201ENST00000562317 1415 ntBASIC13.03□□□□□ -0.32
DNAAF1Q8NEP3 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
DNAAF1Q8NEP3 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
DNAAF1Q8NEP3 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
DNAAF1Q8NEP3 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC13.03□□□□□ -0.32
DNAAF1Q8NEP3 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC13.03□□□□□ -0.32
DNAAF1Q8NEP3 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
DNAAF1Q8NEP3 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
DNAAF1Q8NEP3 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC13.03□□□□□ -0.32
DNAAF1Q8NEP3 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
DNAAF1Q8NEP3 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
DNAAF1Q8NEP3 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
DNAAF1Q8NEP3 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC13.02□□□□□ -0.32
DNAAF1Q8NEP3 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.32
DNAAF1Q8NEP3 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.32
DNAAF1Q8NEP3 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
DNAAF1Q8NEP3 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
DNAAF1Q8NEP3 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC13.02□□□□□ -0.32
DNAAF1Q8NEP3 AC005562.1-201ENST00000583030 3219 ntBASIC13.02□□□□□ -0.32
DNAAF1Q8NEP3 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
DNAAF1Q8NEP3 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
DNAAF1Q8NEP3 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
DNAAF1Q8NEP3 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
DNAAF1Q8NEP3 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
DNAAF1Q8NEP3 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
DNAAF1Q8NEP3 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.32
DNAAF1Q8NEP3 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
DNAAF1Q8NEP3 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
DNAAF1Q8NEP3 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
DNAAF1Q8NEP3 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
DNAAF1Q8NEP3 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
DNAAF1Q8NEP3 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
DNAAF1Q8NEP3 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
DNAAF1Q8NEP3 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms