Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SYNPOQ8N3V7 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC14.9□□□□□ -0.02
SYNPOQ8N3V7 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC14.9□□□□□ -0.02
SYNPOQ8N3V7 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SYNPOQ8N3V7 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SYNPOQ8N3V7 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SYNPOQ8N3V7 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC14.9□□□□□ -0.02
SYNPOQ8N3V7 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC14.9□□□□□ -0.02
SYNPOQ8N3V7 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC14.9□□□□□ -0.02
SYNPOQ8N3V7 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC14.9□□□□□ -0.02
SYNPOQ8N3V7 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
SYNPOQ8N3V7 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SYNPOQ8N3V7 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC14.9□□□□□ -0.02
SYNPOQ8N3V7 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SYNPOQ8N3V7 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC14.9□□□□□ -0.02
SYNPOQ8N3V7 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SYNPOQ8N3V7 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SYNPOQ8N3V7 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SYNPOQ8N3V7 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SYNPOQ8N3V7 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SYNPOQ8N3V7 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SYNPOQ8N3V7 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SYNPOQ8N3V7 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC14.9□□□□□ -0.02
SYNPOQ8N3V7 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SYNPOQ8N3V7 MIR557-201ENST00000385239 98 ntBASIC14.9□□□□□ -0.02
SYNPOQ8N3V7 AL512430.1-201ENST00000392575 860 ntBASIC14.9□□□□□ -0.02
SYNPOQ8N3V7 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC14.9□□□□□ -0.02
SYNPOQ8N3V7 NAGK-204ENST00000443872 878 ntTSL 3 BASIC14.9□□□□□ -0.02
SYNPOQ8N3V7 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC14.9□□□□□ -0.02
SYNPOQ8N3V7 CTBP2P4-201ENST00000513884 920 ntBASIC14.9□□□□□ -0.02
SYNPOQ8N3V7 AC114947.1-202ENST00000514136 344 ntBASIC14.9□□□□□ -0.02
SYNPOQ8N3V7 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SYNPOQ8N3V7 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
SYNPOQ8N3V7 SIGLEC18P-201ENST00000602271 909 ntBASIC14.9□□□□□ -0.02
SYNPOQ8N3V7 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
SYNPOQ8N3V7 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC14.9□□□□□ -0.02
SYNPOQ8N3V7 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SYNPOQ8N3V7 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SYNPOQ8N3V7 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SYNPOQ8N3V7 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
SYNPOQ8N3V7 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SYNPOQ8N3V7 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC14.9□□□□□ -0.02
SYNPOQ8N3V7 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC14.9□□□□□ -0.02
SYNPOQ8N3V7 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC14.9□□□□□ -0.02
SYNPOQ8N3V7 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC14.9□□□□□ -0.02
SYNPOQ8N3V7 AL136379.1-201ENST00000623471 2642 ntBASIC14.9□□□□□ -0.02
SYNPOQ8N3V7 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
SYNPOQ8N3V7 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC14.9□□□□□ -0.02
SYNPOQ8N3V7 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
SYNPOQ8N3V7 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC14.9□□□□□ -0.02
SYNPOQ8N3V7 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SYNPOQ8N3V7 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
SYNPOQ8N3V7 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC14.9□□□□□ -0.02
SYNPOQ8N3V7 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
SYNPOQ8N3V7 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
SYNPOQ8N3V7 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SYNPOQ8N3V7 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
SYNPOQ8N3V7 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SYNPOQ8N3V7 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
SYNPOQ8N3V7 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SYNPOQ8N3V7 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SYNPOQ8N3V7 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC14.89□□□□□ -0.03
SYNPOQ8N3V7 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SYNPOQ8N3V7 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC14.89□□□□□ -0.03
SYNPOQ8N3V7 LINC01165-201ENST00000445190 1623 ntBASIC14.89□□□□□ -0.03
SYNPOQ8N3V7 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SYNPOQ8N3V7 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SYNPOQ8N3V7 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
SYNPOQ8N3V7 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
SYNPOQ8N3V7 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
SYNPOQ8N3V7 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
SYNPOQ8N3V7 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SYNPOQ8N3V7 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC14.89□□□□□ -0.03
SYNPOQ8N3V7 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC14.89□□□□□ -0.03
SYNPOQ8N3V7 AL627422.1-201ENST00000434104 580 ntBASIC14.89□□□□□ -0.03
SYNPOQ8N3V7 RPSAP15-201ENST00000448168 861 ntBASIC14.89□□□□□ -0.03
SYNPOQ8N3V7 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC14.89□□□□□ -0.03
SYNPOQ8N3V7 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC14.89□□□□□ -0.03
SYNPOQ8N3V7 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC14.89□□□□□ -0.03
SYNPOQ8N3V7 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC14.89□□□□□ -0.03
SYNPOQ8N3V7 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
SYNPOQ8N3V7 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
SYNPOQ8N3V7 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC14.89□□□□□ -0.03
SYNPOQ8N3V7 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC14.89□□□□□ -0.03
SYNPOQ8N3V7 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SYNPOQ8N3V7 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SYNPOQ8N3V7 AC092299.1-201ENST00000632679 757 ntBASIC14.89□□□□□ -0.03
SYNPOQ8N3V7 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC14.89□□□□□ -0.03
SYNPOQ8N3V7 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
SYNPOQ8N3V7 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
SYNPOQ8N3V7 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC14.89□□□□□ -0.03
SYNPOQ8N3V7 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SYNPOQ8N3V7 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SYNPOQ8N3V7 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC14.89□□□□□ -0.03
SYNPOQ8N3V7 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SYNPOQ8N3V7 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SYNPOQ8N3V7 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SYNPOQ8N3V7 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC14.89□□□□□ -0.03
SYNPOQ8N3V7 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
SYNPOQ8N3V7 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms