Protein–RNA interactions for Protein: Q7LGC8

CHST3, Carbohydrate sulfotransferase 3, humanhuman

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHST3Q7LGC8 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC17.37■□□□□ 0.37
CHST3Q7LGC8 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHST3Q7LGC8 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHST3Q7LGC8 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHST3Q7LGC8 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC17.37■□□□□ 0.37
CHST3Q7LGC8 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CHST3Q7LGC8 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC17.37■□□□□ 0.37
CHST3Q7LGC8 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHST3Q7LGC8 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
CHST3Q7LGC8 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHST3Q7LGC8 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHST3Q7LGC8 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHST3Q7LGC8 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHST3Q7LGC8 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHST3Q7LGC8 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHST3Q7LGC8 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC17.37■□□□□ 0.37
CHST3Q7LGC8 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHST3Q7LGC8 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CHST3Q7LGC8 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHST3Q7LGC8 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC17.37■□□□□ 0.37
CHST3Q7LGC8 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
CHST3Q7LGC8 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC17.37■□□□□ 0.37
CHST3Q7LGC8 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CHST3Q7LGC8 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC17.37■□□□□ 0.37
CHST3Q7LGC8 AC108725.1-201ENST00000495472 409 ntBASIC17.37■□□□□ 0.37
CHST3Q7LGC8 NCK2-206ENST00000522586 490 ntTSL 5 BASIC17.37■□□□□ 0.37
CHST3Q7LGC8 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC17.37■□□□□ 0.37
CHST3Q7LGC8 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC17.37■□□□□ 0.37
CHST3Q7LGC8 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC17.37■□□□□ 0.37
CHST3Q7LGC8 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC17.37■□□□□ 0.37
CHST3Q7LGC8 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHST3Q7LGC8 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC17.37■□□□□ 0.37
CHST3Q7LGC8 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CHST3Q7LGC8 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CHST3Q7LGC8 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHST3Q7LGC8 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC17.37■□□□□ 0.37
CHST3Q7LGC8 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHST3Q7LGC8 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CHST3Q7LGC8 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CHST3Q7LGC8 KRT8P28-201ENST00000433288 1390 ntBASIC17.37■□□□□ 0.37
CHST3Q7LGC8 CICP16-201ENST00000502609 2813 ntBASIC17.37■□□□□ 0.37
CHST3Q7LGC8 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHST3Q7LGC8 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHST3Q7LGC8 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHST3Q7LGC8 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHST3Q7LGC8 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHST3Q7LGC8 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
CHST3Q7LGC8 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHST3Q7LGC8 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CHST3Q7LGC8 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CHST3Q7LGC8 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC17.36■□□□□ 0.37
CHST3Q7LGC8 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC17.36■□□□□ 0.37
CHST3Q7LGC8 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC17.36■□□□□ 0.37
CHST3Q7LGC8 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC17.36■□□□□ 0.37
CHST3Q7LGC8 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHST3Q7LGC8 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHST3Q7LGC8 NIN-202ENST00000324330 4364 ntTSL 5 BASIC17.36■□□□□ 0.37
CHST3Q7LGC8 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHST3Q7LGC8 AC010141.1-201ENST00000411585 623 ntBASIC17.36■□□□□ 0.37
CHST3Q7LGC8 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC17.36■□□□□ 0.37
CHST3Q7LGC8 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC17.36■□□□□ 0.37
CHST3Q7LGC8 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC17.36■□□□□ 0.37
CHST3Q7LGC8 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CHST3Q7LGC8 RIT1-205ENST00000539040 919 ntTSL 2 BASIC17.36■□□□□ 0.37
CHST3Q7LGC8 AC027601.3-201ENST00000622907 509 ntBASIC17.36■□□□□ 0.37
CHST3Q7LGC8 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHST3Q7LGC8 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CHST3Q7LGC8 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CHST3Q7LGC8 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CHST3Q7LGC8 OR2I1P-210ENST00000642037 4691 ntBASIC17.36■□□□□ 0.37
CHST3Q7LGC8 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CHST3Q7LGC8 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC17.36■□□□□ 0.37
CHST3Q7LGC8 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CHST3Q7LGC8 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHST3Q7LGC8 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHST3Q7LGC8 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHST3Q7LGC8 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CHST3Q7LGC8 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHST3Q7LGC8 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC17.36■□□□□ 0.37
CHST3Q7LGC8 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHST3Q7LGC8 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC17.36■□□□□ 0.37
CHST3Q7LGC8 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CHST3Q7LGC8 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
CHST3Q7LGC8 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHST3Q7LGC8 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
CHST3Q7LGC8 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHST3Q7LGC8 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
CHST3Q7LGC8 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CHST3Q7LGC8 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC17.36■□□□□ 0.37
CHST3Q7LGC8 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
CHST3Q7LGC8 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHST3Q7LGC8 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHST3Q7LGC8 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CHST3Q7LGC8 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CHST3Q7LGC8 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHST3Q7LGC8 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHST3Q7LGC8 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHST3Q7LGC8 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHST3Q7LGC8 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CHST3Q7LGC8 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms