Protein–RNA interactions for Protein: Q6PIL6

KCNIP4, Kv channel-interacting protein 4, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4Q6PIL6 IFT88-202ENST00000351808 2856 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
KCNIP4Q6PIL6 ZBTB20-206ENST00000464560 2816 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
KCNIP4Q6PIL6 PJA1-203ENST00000374583 2692 ntAPPRIS P4 BASIC11.47□□□□□ -0.57
KCNIP4Q6PIL6 BIRC5-202ENST00000350051 2630 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
KCNIP4Q6PIL6 GNPDA1-204ENST00000503794 2622 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
KCNIP4Q6PIL6 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
KCNIP4Q6PIL6 RBM19-201ENST00000261741 4194 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
KCNIP4Q6PIL6 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
KCNIP4Q6PIL6 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
KCNIP4Q6PIL6 PCDHGA8-202ENST00000610569 6480 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
KCNIP4Q6PIL6 VSTM4-202ENST00000332853 6392 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
KCNIP4Q6PIL6 NUP58-206ENST00000463407 6360 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
KCNIP4Q6PIL6 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
KCNIP4Q6PIL6 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
KCNIP4Q6PIL6 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC11.46□□□□□ -0.57
KCNIP4Q6PIL6 SEC31A-205ENST00000395310 4259 ntAPPRIS P4 TSL 1 (best) BASIC11.46□□□□□ -0.57
KCNIP4Q6PIL6 KCNIP1-208ENST00000520740 1845 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
KCNIP4Q6PIL6 PRKAB2-201ENST00000254101 5417 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
KCNIP4Q6PIL6 SYMPK-201ENST00000245934 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
KCNIP4Q6PIL6 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
KCNIP4Q6PIL6 TK1-203ENST00000588734 1681 ntTSL 2 BASIC11.46□□□□□ -0.57
KCNIP4Q6PIL6 FZD7-201ENST00000286201 3859 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
KCNIP4Q6PIL6 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC11.46□□□□□ -0.57
KCNIP4Q6PIL6 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
KCNIP4Q6PIL6 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
KCNIP4Q6PIL6 TSC22D1-203ENST00000458659 4820 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
KCNIP4Q6PIL6 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.57
KCNIP4Q6PIL6 EIF2AK1-201ENST00000199389 4469 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
KCNIP4Q6PIL6 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
KCNIP4Q6PIL6 MKRN5P-201ENST00000445263 1467 ntBASIC11.46□□□□□ -0.57
KCNIP4Q6PIL6 CNKSR2-207ENST00000543067 4355 ntTSL 2 BASIC11.46□□□□□ -0.57
KCNIP4Q6PIL6 TUBGCP2-210ENST00000543663 4302 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
KCNIP4Q6PIL6 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC11.46□□□□□ -0.57
KCNIP4Q6PIL6 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC11.46□□□□□ -0.57
KCNIP4Q6PIL6 EMBP1-203ENST00000622787 4235 ntTSL 2 BASIC11.46□□□□□ -0.57
KCNIP4Q6PIL6 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
KCNIP4Q6PIL6 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
KCNIP4Q6PIL6 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
KCNIP4Q6PIL6 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
KCNIP4Q6PIL6 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
KCNIP4Q6PIL6 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
KCNIP4Q6PIL6 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC11.46□□□□□ -0.57
KCNIP4Q6PIL6 AC073621.1-201ENST00000392730 636 ntBASIC11.46□□□□□ -0.57
KCNIP4Q6PIL6 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
KCNIP4Q6PIL6 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
KCNIP4Q6PIL6 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC11.46□□□□□ -0.57
KCNIP4Q6PIL6 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC11.46□□□□□ -0.57
KCNIP4Q6PIL6 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC11.46□□□□□ -0.57
KCNIP4Q6PIL6 AL513480.1-201ENST00000451731 511 ntBASIC11.46□□□□□ -0.57
KCNIP4Q6PIL6 AC018712.1-201ENST00000455767 687 ntBASIC11.46□□□□□ -0.57
KCNIP4Q6PIL6 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC11.46□□□□□ -0.57
KCNIP4Q6PIL6 CXCL1P1-201ENST00000502804 216 ntBASIC11.46□□□□□ -0.57
KCNIP4Q6PIL6 MAL2-202ENST00000531508 892 ntTSL 3 BASIC11.46□□□□□ -0.57
KCNIP4Q6PIL6 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC11.46□□□□□ -0.57
KCNIP4Q6PIL6 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC11.46□□□□□ -0.57
KCNIP4Q6PIL6 RIN3-211ENST00000557762 517 ntTSL 3 BASIC11.46□□□□□ -0.57
KCNIP4Q6PIL6 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC11.46□□□□□ -0.57
KCNIP4Q6PIL6 CD22-209ENST00000594250 2107 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
KCNIP4Q6PIL6 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
KCNIP4Q6PIL6 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC11.46□□□□□ -0.57
KCNIP4Q6PIL6 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC11.46□□□□□ -0.57
KCNIP4Q6PIL6 FAM215A-202ENST00000632077 792 ntBASIC11.46□□□□□ -0.57
KCNIP4Q6PIL6 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
KCNIP4Q6PIL6 NGLY1-205ENST00000417874 2062 ntTSL 2 BASIC11.46□□□□□ -0.57
KCNIP4Q6PIL6 PRKD1-201ENST00000331968 3726 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
KCNIP4Q6PIL6 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
KCNIP4Q6PIL6 DHX30-215ENST00000619982 3574 ntAPPRIS ALT1 TSL 5 BASIC11.46□□□□□ -0.58
KCNIP4Q6PIL6 KCNS2-202ENST00000521839 4340 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
KCNIP4Q6PIL6 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
KCNIP4Q6PIL6 BDH1-202ENST00000392378 3455 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
KCNIP4Q6PIL6 HAUS6-202ENST00000380502 6536 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
KCNIP4Q6PIL6 EXOC3-201ENST00000315013 2682 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.58
KCNIP4Q6PIL6 FAM201A-201ENST00000377680 3437 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
KCNIP4Q6PIL6 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC11.46□□□□□ -0.58
KCNIP4Q6PIL6 PCNX4-202ENST00000391611 4073 ntTSL 2 BASIC11.46□□□□□ -0.58
KCNIP4Q6PIL6 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
KCNIP4Q6PIL6 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
KCNIP4Q6PIL6 GAB2-201ENST00000340149 6052 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
KCNIP4Q6PIL6 CEP68-201ENST00000260569 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
KCNIP4Q6PIL6 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
KCNIP4Q6PIL6 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.58
KCNIP4Q6PIL6 TMEM100-201ENST00000424486 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
KCNIP4Q6PIL6 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
KCNIP4Q6PIL6 HJURP-207ENST00000441687 2934 ntAPPRIS ALT2 TSL 2 BASIC11.46□□□□□ -0.58
KCNIP4Q6PIL6 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC11.46□□□□□ -0.58
KCNIP4Q6PIL6 ZFC3H1-201ENST00000378743 7285 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
KCNIP4Q6PIL6 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC11.45□□□□□ -0.58
KCNIP4Q6PIL6 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
KCNIP4Q6PIL6 AL607033.1-201ENST00000623900 1599 ntBASIC11.45□□□□□ -0.58
KCNIP4Q6PIL6 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
KCNIP4Q6PIL6 TRIM26-267ENST00000453195 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
KCNIP4Q6PIL6 ABCC3-201ENST00000285238 5716 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
KCNIP4Q6PIL6 CPPED1-202ENST00000381774 6273 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
KCNIP4Q6PIL6 AP000437.1-201ENST00000624057 2085 ntBASIC11.45□□□□□ -0.58
KCNIP4Q6PIL6 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
KCNIP4Q6PIL6 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC11.45□□□□□ -0.58
KCNIP4Q6PIL6 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
KCNIP4Q6PIL6 PAPLN-203ENST00000554301 4090 ntAPPRIS ALT2 TSL 2 BASIC11.45□□□□□ -0.58
KCNIP4Q6PIL6 AC006254.1-201ENST00000468472 5640 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
KCNIP4Q6PIL6 TESMIN-204ENST00000443940 3495 ntTSL 2 BASIC11.45□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 62.5 ms