Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 OXR1-202ENST00000312046 4406 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
MRPL54Q6P161 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
MRPL54Q6P161 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
MRPL54Q6P161 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC11.16□□□□□ -0.62
MRPL54Q6P161 ESYT1-202ENST00000394048 4388 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
MRPL54Q6P161 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC11.16□□□□□ -0.62
MRPL54Q6P161 CAMTA2-204ENST00000414043 4589 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
MRPL54Q6P161 HSPA8P5-201ENST00000456928 2069 ntBASIC11.16□□□□□ -0.62
MRPL54Q6P161 IFT88-202ENST00000351808 2856 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
MRPL54Q6P161 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
MRPL54Q6P161 ARHGEF10L-202ENST00000361221 4488 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
MRPL54Q6P161 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
MRPL54Q6P161 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
MRPL54Q6P161 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC11.16□□□□□ -0.62
MRPL54Q6P161 CICP1-201ENST00000416803 2410 ntBASIC11.16□□□□□ -0.62
MRPL54Q6P161 FNTB-201ENST00000246166 2834 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
MRPL54Q6P161 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC11.16□□□□□ -0.62
MRPL54Q6P161 RGS12-202ENST00000338806 3010 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
MRPL54Q6P161 RPS6KC1-209ENST00000615329 4022 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
MRPL54Q6P161 CANX-202ENST00000452673 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
MRPL54Q6P161 STARD8-203ENST00000374599 4841 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
MRPL54Q6P161 FOXK1-201ENST00000328914 11181 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
MRPL54Q6P161 AP2A2-202ENST00000448903 4575 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
MRPL54Q6P161 PPT2-EGFL8-202ENST00000422437 4181 ntAPPRIS P5 TSL 5 BASIC11.16□□□□□ -0.62
MRPL54Q6P161 STK25-235ENST00000543554 2556 ntTSL 2 BASIC11.16□□□□□ -0.62
MRPL54Q6P161 AL157414.3-201ENST00000624276 1954 ntBASIC11.16□□□□□ -0.62
MRPL54Q6P161 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC11.16□□□□□ -0.62
MRPL54Q6P161 CELSR3-201ENST00000164024 11956 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
MRPL54Q6P161 ZNF398-201ENST00000426851 5268 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
MRPL54Q6P161 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
MRPL54Q6P161 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC11.15□□□□□ -0.62
MRPL54Q6P161 ABCA2-202ENST00000341511 8063 ntAPPRIS P2 TSL 5 BASIC11.15□□□□□ -0.62
MRPL54Q6P161 SIRPA-203ENST00000400068 4201 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
MRPL54Q6P161 MYRIP-204ENST00000444716 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
MRPL54Q6P161 STK3-218ENST00000617590 2485 ntTSL 5 BASIC11.15□□□□□ -0.62
MRPL54Q6P161 MARCH3-201ENST00000308660 4196 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
MRPL54Q6P161 LHCGR-201ENST00000294954 3044 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
MRPL54Q6P161 PTPN5-205ENST00000477854 2826 ntTSL 5 BASIC11.15□□□□□ -0.62
MRPL54Q6P161 SRPK3-208ENST00000489426 4479 ntAPPRIS ALT2 TSL 2 BASIC11.15□□□□□ -0.62
MRPL54Q6P161 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC11.15□□□□□ -0.62
MRPL54Q6P161 ITPRIP-201ENST00000278071 6807 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
MRPL54Q6P161 ICE1-201ENST00000296564 7927 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
MRPL54Q6P161 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
MRPL54Q6P161 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
MRPL54Q6P161 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
MRPL54Q6P161 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC11.15□□□□□ -0.62
MRPL54Q6P161 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
MRPL54Q6P161 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
MRPL54Q6P161 RHOQP3-201ENST00000437982 621 ntBASIC11.15□□□□□ -0.62
MRPL54Q6P161 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC11.15□□□□□ -0.62
MRPL54Q6P161 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC11.15□□□□□ -0.62
MRPL54Q6P161 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC11.15□□□□□ -0.62
MRPL54Q6P161 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC11.15□□□□□ -0.62
MRPL54Q6P161 TCAP-202ENST00000578283 583 ntTSL 5 BASIC11.15□□□□□ -0.62
MRPL54Q6P161 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC11.15□□□□□ -0.62
MRPL54Q6P161 AC027307.2-201ENST00000591252 911 ntBASIC11.15□□□□□ -0.62
MRPL54Q6P161 NKG7-205ENST00000600427 520 ntTSL 3 BASIC11.15□□□□□ -0.62
MRPL54Q6P161 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
MRPL54Q6P161 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
MRPL54Q6P161 PCCB-210ENST00000471595 6090 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
MRPL54Q6P161 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
MRPL54Q6P161 CEP78-205ENST00000424347 11198 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
MRPL54Q6P161 DCAF6-201ENST00000312263 3186 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
MRPL54Q6P161 TUBGCP4-201ENST00000260383 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC11.15□□□□□ -0.62
MRPL54Q6P161 RAB37-204ENST00000392613 2617 ntAPPRIS ALT1 TSL 2 BASIC11.15□□□□□ -0.62
MRPL54Q6P161 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC11.15□□□□□ -0.62
MRPL54Q6P161 MAP3K9-205ENST00000554752 11169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
MRPL54Q6P161 ST3GAL2-202ENST00000393640 8872 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
MRPL54Q6P161 FAM157A-203ENST00000634862 6083 ntTSL 5 BASIC11.15□□□□□ -0.63
MRPL54Q6P161 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
MRPL54Q6P161 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
MRPL54Q6P161 DPY19L2P2-205ENST00000439473 3994 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
MRPL54Q6P161 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
MRPL54Q6P161 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.63
MRPL54Q6P161 NCBP1-202ENST00000375147 5178 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
MRPL54Q6P161 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC11.15□□□□□ -0.63
MRPL54Q6P161 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
MRPL54Q6P161 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC11.15□□□□□ -0.63
MRPL54Q6P161 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.63
MRPL54Q6P161 SPDYE16-203ENST00000633306 2591 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.63
MRPL54Q6P161 SRC-204ENST00000373578 4630 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.63
MRPL54Q6P161 EWSAT1-201ENST00000415504 2214 ntTSL 2 BASIC11.15□□□□□ -0.63
MRPL54Q6P161 PCDHB9-201ENST00000316105 4415 ntAPPRIS P1 BASIC11.15□□□□□ -0.63
MRPL54Q6P161 PCNX4-202ENST00000391611 4073 ntTSL 2 BASIC11.14□□□□□ -0.63
MRPL54Q6P161 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
MRPL54Q6P161 ANKRD20A1-201ENST00000562196 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
MRPL54Q6P161 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC11.14□□□□□ -0.63
MRPL54Q6P161 ZBTB20-206ENST00000464560 2816 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
MRPL54Q6P161 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
MRPL54Q6P161 KCNIP1-208ENST00000520740 1845 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
MRPL54Q6P161 HSPH1-204ENST00000445273 4987 ntTSL 2 BASIC11.14□□□□□ -0.63
MRPL54Q6P161 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
MRPL54Q6P161 TJP2-206ENST00000453658 4129 ntAPPRIS ALT2 TSL 2 BASIC11.14□□□□□ -0.63
MRPL54Q6P161 NCLP1-201ENST00000445357 1963 ntBASIC11.14□□□□□ -0.63
MRPL54Q6P161 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
MRPL54Q6P161 CLK3P2-201ENST00000427566 1453 ntBASIC11.14□□□□□ -0.63
MRPL54Q6P161 SDC3-201ENST00000336798 6392 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
MRPL54Q6P161 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
MRPL54Q6P161 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
MRPL54Q6P161 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms