Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 NCS1-201ENST00000372398 4991 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LPCAT4Q643R3 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
LPCAT4Q643R3 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC13.9□□□□□ -0.19
LPCAT4Q643R3 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.19
LPCAT4Q643R3 SFRP1-202ENST00000379845 3873 ntTSL 2 BASIC13.9□□□□□ -0.19
LPCAT4Q643R3 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LPCAT4Q643R3 NTNG1-204ENST00000370067 4628 ntTSL 5 BASIC13.89□□□□□ -0.19
LPCAT4Q643R3 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
LPCAT4Q643R3 AMOTL2-202ENST00000422605 4335 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
LPCAT4Q643R3 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LPCAT4Q643R3 COPS7B-223ENST00000611614 2468 ntTSL 3 BASIC13.89□□□□□ -0.19
LPCAT4Q643R3 CREBZF-204ENST00000527447 4037 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
LPCAT4Q643R3 CNTD1-204ENST00000588408 2369 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LPCAT4Q643R3 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LPCAT4Q643R3 COBLL1-225ENST00000629362 3868 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
LPCAT4Q643R3 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LPCAT4Q643R3 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LPCAT4Q643R3 ENOX1-201ENST00000261488 2982 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LPCAT4Q643R3 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
LPCAT4Q643R3 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
LPCAT4Q643R3 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LPCAT4Q643R3 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
LPCAT4Q643R3 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC13.89□□□□□ -0.19
LPCAT4Q643R3 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC13.89□□□□□ -0.19
LPCAT4Q643R3 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC13.89□□□□□ -0.19
LPCAT4Q643R3 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC13.89□□□□□ -0.19
LPCAT4Q643R3 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
LPCAT4Q643R3 AC004066.1-201ENST00000502488 802 ntBASIC13.89□□□□□ -0.19
LPCAT4Q643R3 AC093909.1-201ENST00000504731 1122 ntBASIC13.89□□□□□ -0.19
LPCAT4Q643R3 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC13.89□□□□□ -0.19
LPCAT4Q643R3 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC13.89□□□□□ -0.19
LPCAT4Q643R3 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC13.89□□□□□ -0.19
LPCAT4Q643R3 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
LPCAT4Q643R3 CD63-204ENST00000546939 779 ntTSL 3 BASIC13.89□□□□□ -0.19
LPCAT4Q643R3 RNF34-208ENST00000555076 593 ntTSL 3 BASIC13.89□□□□□ -0.19
LPCAT4Q643R3 PDPK2P-202ENST00000562415 1191 ntBASIC13.89□□□□□ -0.19
LPCAT4Q643R3 LINC01225-203ENST00000563550 1244 ntBASIC13.89□□□□□ -0.19
LPCAT4Q643R3 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC13.89□□□□□ -0.19
LPCAT4Q643R3 HFE2-206ENST00000634927 506 ntTSL 4 BASIC13.89□□□□□ -0.19
LPCAT4Q643R3 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
LPCAT4Q643R3 SGK2-203ENST00000373092 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LPCAT4Q643R3 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
LPCAT4Q643R3 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
LPCAT4Q643R3 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LPCAT4Q643R3 TMEM100-201ENST00000424486 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LPCAT4Q643R3 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LPCAT4Q643R3 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LPCAT4Q643R3 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
LPCAT4Q643R3 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC13.89□□□□□ -0.19
LPCAT4Q643R3 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
LPCAT4Q643R3 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
LPCAT4Q643R3 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LPCAT4Q643R3 DDX43-201ENST00000370336 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LPCAT4Q643R3 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LPCAT4Q643R3 SLC2A14-213ENST00000539924 1873 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
LPCAT4Q643R3 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
LPCAT4Q643R3 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LPCAT4Q643R3 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
LPCAT4Q643R3 LINC02486-201ENST00000604157 3000 ntBASIC13.88□□□□□ -0.19
LPCAT4Q643R3 SLC5A4-201ENST00000266086 2030 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LPCAT4Q643R3 HERPUD1-204ENST00000439977 2946 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
LPCAT4Q643R3 FAM200A-202ENST00000449309 2480 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
LPCAT4Q643R3 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LPCAT4Q643R3 PRKD1-201ENST00000331968 3726 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
LPCAT4Q643R3 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
LPCAT4Q643R3 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LPCAT4Q643R3 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
LPCAT4Q643R3 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LPCAT4Q643R3 RBM10-201ENST00000329236 3201 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
LPCAT4Q643R3 UNK-205ENST00000589666 3925 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LPCAT4Q643R3 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
LPCAT4Q643R3 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
LPCAT4Q643R3 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
LPCAT4Q643R3 MRPL3P1-201ENST00000400109 1033 ntBASIC13.88□□□□□ -0.19
LPCAT4Q643R3 AC015922.1-201ENST00000421102 1152 ntBASIC13.88□□□□□ -0.19
LPCAT4Q643R3 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC13.88□□□□□ -0.19
LPCAT4Q643R3 KRT18P2-201ENST00000447938 1258 ntBASIC13.88□□□□□ -0.19
LPCAT4Q643R3 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC13.88□□□□□ -0.19
LPCAT4Q643R3 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC13.88□□□□□ -0.19
LPCAT4Q643R3 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC13.88□□□□□ -0.19
LPCAT4Q643R3 FAM86C2P-203ENST00000528684 1004 ntBASIC13.88□□□□□ -0.19
LPCAT4Q643R3 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC13.88□□□□□ -0.19
LPCAT4Q643R3 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC13.88□□□□□ -0.19
LPCAT4Q643R3 AC243562.1-201ENST00000560672 389 ntBASIC13.88□□□□□ -0.19
LPCAT4Q643R3 AC106730.1-201ENST00000566722 1090 ntBASIC13.88□□□□□ -0.19
LPCAT4Q643R3 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC13.88□□□□□ -0.19
LPCAT4Q643R3 AC144450.1-201ENST00000366424 1641 ntTSL 2 BASIC13.88□□□□□ -0.19
LPCAT4Q643R3 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
LPCAT4Q643R3 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC13.88□□□□□ -0.19
LPCAT4Q643R3 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
LPCAT4Q643R3 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC13.88□□□□□ -0.19
LPCAT4Q643R3 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
LPCAT4Q643R3 AL731571.1-201ENST00000617058 5428 ntBASIC13.88□□□□□ -0.19
LPCAT4Q643R3 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
LPCAT4Q643R3 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LPCAT4Q643R3 HOXA7-201ENST00000242159 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LPCAT4Q643R3 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
LPCAT4Q643R3 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LPCAT4Q643R3 PITX2-211ENST00000613094 3240 ntAPPRIS ALT1 TSL 5 BASIC13.88□□□□□ -0.19
LPCAT4Q643R3 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms