Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
TTC39BQ5VTQ0 KRT8P4-201ENST00000509735 1454 ntBASIC15.37■□□□□ 0.05
TTC39BQ5VTQ0 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TTC39BQ5VTQ0 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
TTC39BQ5VTQ0 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TTC39BQ5VTQ0 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TTC39BQ5VTQ0 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TTC39BQ5VTQ0 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TTC39BQ5VTQ0 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TTC39BQ5VTQ0 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC15.37■□□□□ 0.05
TTC39BQ5VTQ0 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TTC39BQ5VTQ0 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TTC39BQ5VTQ0 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TTC39BQ5VTQ0 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TTC39BQ5VTQ0 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC15.36■□□□□ 0.05
TTC39BQ5VTQ0 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TTC39BQ5VTQ0 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TTC39BQ5VTQ0 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TTC39BQ5VTQ0 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
TTC39BQ5VTQ0 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TTC39BQ5VTQ0 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC15.36■□□□□ 0.05
TTC39BQ5VTQ0 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC15.36■□□□□ 0.05
TTC39BQ5VTQ0 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
TTC39BQ5VTQ0 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
TTC39BQ5VTQ0 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC15.36■□□□□ 0.05
TTC39BQ5VTQ0 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC15.36■□□□□ 0.05
TTC39BQ5VTQ0 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC15.36■□□□□ 0.05
TTC39BQ5VTQ0 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TTC39BQ5VTQ0 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC15.36■□□□□ 0.05
TTC39BQ5VTQ0 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
TTC39BQ5VTQ0 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TTC39BQ5VTQ0 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TTC39BQ5VTQ0 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
TTC39BQ5VTQ0 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TTC39BQ5VTQ0 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
TTC39BQ5VTQ0 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
TTC39BQ5VTQ0 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
TTC39BQ5VTQ0 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TTC39BQ5VTQ0 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TTC39BQ5VTQ0 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TTC39BQ5VTQ0 BTBD6P1-201ENST00000412176 1267 ntBASIC15.36■□□□□ 0.05
TTC39BQ5VTQ0 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC15.36■□□□□ 0.05
TTC39BQ5VTQ0 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TTC39BQ5VTQ0 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
TTC39BQ5VTQ0 PFN1P12-201ENST00000455938 534 ntBASIC15.36■□□□□ 0.05
TTC39BQ5VTQ0 ACR-203ENST00000529621 708 ntTSL 5 BASIC15.36■□□□□ 0.05
TTC39BQ5VTQ0 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC15.36■□□□□ 0.05
TTC39BQ5VTQ0 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC15.36■□□□□ 0.05
TTC39BQ5VTQ0 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
TTC39BQ5VTQ0 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC15.36■□□□□ 0.05
TTC39BQ5VTQ0 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC15.36■□□□□ 0.05
TTC39BQ5VTQ0 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
TTC39BQ5VTQ0 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
TTC39BQ5VTQ0 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TTC39BQ5VTQ0 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TTC39BQ5VTQ0 BANP-203ENST00000393207 2438 ntTSL 2 BASIC15.36■□□□□ 0.05
TTC39BQ5VTQ0 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
TTC39BQ5VTQ0 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TTC39BQ5VTQ0 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TTC39BQ5VTQ0 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC15.36■□□□□ 0.05
TTC39BQ5VTQ0 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC15.36■□□□□ 0.05
TTC39BQ5VTQ0 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC15.36■□□□□ 0.05
TTC39BQ5VTQ0 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TTC39BQ5VTQ0 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC15.36■□□□□ 0.05
TTC39BQ5VTQ0 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TTC39BQ5VTQ0 AC104581.4-201ENST00000623126 3052 ntBASIC15.35■□□□□ 0.05
TTC39BQ5VTQ0 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
TTC39BQ5VTQ0 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
TTC39BQ5VTQ0 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC15.35■□□□□ 0.05
TTC39BQ5VTQ0 CNTNAP3P2-201ENST00000617175 3861 ntBASIC15.35■□□□□ 0.05
TTC39BQ5VTQ0 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC15.35■□□□□ 0.05
TTC39BQ5VTQ0 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
TTC39BQ5VTQ0 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
TTC39BQ5VTQ0 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
TTC39BQ5VTQ0 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC15.35■□□□□ 0.05
TTC39BQ5VTQ0 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC15.35■□□□□ 0.05
TTC39BQ5VTQ0 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TTC39BQ5VTQ0 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TTC39BQ5VTQ0 REXO1L6P-201ENST00000603433 1515 ntBASIC15.35■□□□□ 0.05
TTC39BQ5VTQ0 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TTC39BQ5VTQ0 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC15.35■□□□□ 0.05
TTC39BQ5VTQ0 ACTBP11-201ENST00000436287 1126 ntBASIC15.35■□□□□ 0.05
TTC39BQ5VTQ0 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TTC39BQ5VTQ0 AC131206.1-201ENST00000538078 1211 ntBASIC15.35■□□□□ 0.05
TTC39BQ5VTQ0 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC15.35■□□□□ 0.05
TTC39BQ5VTQ0 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC15.35■□□□□ 0.05
TTC39BQ5VTQ0 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC15.35■□□□□ 0.05
TTC39BQ5VTQ0 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC15.35■□□□□ 0.05
TTC39BQ5VTQ0 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TTC39BQ5VTQ0 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
TTC39BQ5VTQ0 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC15.35■□□□□ 0.05
TTC39BQ5VTQ0 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC15.35■□□□□ 0.05
TTC39BQ5VTQ0 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC15.35■□□□□ 0.05
TTC39BQ5VTQ0 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC15.35■□□□□ 0.05
TTC39BQ5VTQ0 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
TTC39BQ5VTQ0 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TTC39BQ5VTQ0 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
TTC39BQ5VTQ0 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TTC39BQ5VTQ0 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC15.35■□□□□ 0.05
TTC39BQ5VTQ0 CCR7-201ENST00000246657 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms