Protein–RNA interactions for Protein: Q587J8

KHDC3L, KHDC3-like protein, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC3LQ587J8 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
KHDC3LQ587J8 AL591424.1-201ENST00000442569 1213 ntBASIC11.79□□□□□ -0.52
KHDC3LQ587J8 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
KHDC3LQ587J8 FAM189A2-204ENST00000455972 2107 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
KHDC3LQ587J8 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC11.79□□□□□ -0.52
KHDC3LQ587J8 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC11.79□□□□□ -0.52
KHDC3LQ587J8 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC11.79□□□□□ -0.52
KHDC3LQ587J8 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC11.79□□□□□ -0.52
KHDC3LQ587J8 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC11.79□□□□□ -0.52
KHDC3LQ587J8 SAMD11P1-201ENST00000571429 661 ntBASIC11.79□□□□□ -0.52
KHDC3LQ587J8 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC11.79□□□□□ -0.52
KHDC3LQ587J8 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
KHDC3LQ587J8 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC11.79□□□□□ -0.52
KHDC3LQ587J8 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC11.79□□□□□ -0.52
KHDC3LQ587J8 AC092902.6-201ENST00000641783 218 ntBASIC11.79□□□□□ -0.52
KHDC3LQ587J8 AC092865.6-201ENST00000642101 219 ntBASIC11.79□□□□□ -0.52
KHDC3LQ587J8 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
KHDC3LQ587J8 RHPN1-AS1-201ENST00000518049 1918 ntBASIC11.79□□□□□ -0.52
KHDC3LQ587J8 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
KHDC3LQ587J8 RS1-201ENST00000379984 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
KHDC3LQ587J8 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
KHDC3LQ587J8 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
KHDC3LQ587J8 TRAK1-201ENST00000327628 5293 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
KHDC3LQ587J8 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC11.79□□□□□ -0.52
KHDC3LQ587J8 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
KHDC3LQ587J8 AC072061.1-201ENST00000569710 2234 ntBASIC11.79□□□□□ -0.52
KHDC3LQ587J8 DLGAP3-201ENST00000235180 3587 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
KHDC3LQ587J8 WARS-203ENST00000358655 2466 ntTSL 2 BASIC11.79□□□□□ -0.52
KHDC3LQ587J8 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
KHDC3LQ587J8 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC11.79□□□□□ -0.52
KHDC3LQ587J8 FP325330.2-201ENST00000624219 5630 ntBASIC11.79□□□□□ -0.52
KHDC3LQ587J8 GRAMD1B-216ENST00000638157 3849 ntTSL 5 BASIC11.79□□□□□ -0.52
KHDC3LQ587J8 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
KHDC3LQ587J8 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
KHDC3LQ587J8 KCNMA1-285ENST00000640605 3864 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
KHDC3LQ587J8 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
KHDC3LQ587J8 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
KHDC3LQ587J8 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC11.79□□□□□ -0.52
KHDC3LQ587J8 KRT8P12-202ENST00000472924 1397 ntBASIC11.79□□□□□ -0.52
KHDC3LQ587J8 MTSS1-201ENST00000325064 2777 ntTSL 2 BASIC11.79□□□□□ -0.52
KHDC3LQ587J8 AC016738.1-201ENST00000452364 3485 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
KHDC3LQ587J8 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
KHDC3LQ587J8 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC11.78□□□□□ -0.52
KHDC3LQ587J8 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC11.78□□□□□ -0.52
KHDC3LQ587J8 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC11.78□□□□□ -0.52
KHDC3LQ587J8 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
KHDC3LQ587J8 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
KHDC3LQ587J8 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
KHDC3LQ587J8 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC11.78□□□□□ -0.52
KHDC3LQ587J8 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
KHDC3LQ587J8 PRDM10-202ENST00000358825 6322 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
KHDC3LQ587J8 PRDM10-203ENST00000360871 6301 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
KHDC3LQ587J8 ZHX1-202ENST00000395571 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
KHDC3LQ587J8 CYP2AB1P-202ENST00000454440 1456 ntBASIC11.78□□□□□ -0.52
KHDC3LQ587J8 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC11.78□□□□□ -0.52
KHDC3LQ587J8 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
KHDC3LQ587J8 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
KHDC3LQ587J8 MYRIP-203ENST00000425621 2981 ntTSL 2 BASIC11.78□□□□□ -0.52
KHDC3LQ587J8 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
KHDC3LQ587J8 CMIP-208ENST00000566462 3512 ntTSL 4 BASIC11.78□□□□□ -0.52
KHDC3LQ587J8 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC11.78□□□□□ -0.52
KHDC3LQ587J8 RN7SL832P-201ENST00000607781 1756 ntBASIC11.78□□□□□ -0.52
KHDC3LQ587J8 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
KHDC3LQ587J8 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
KHDC3LQ587J8 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
KHDC3LQ587J8 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
KHDC3LQ587J8 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC11.78□□□□□ -0.52
KHDC3LQ587J8 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
KHDC3LQ587J8 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC11.78□□□□□ -0.52
KHDC3LQ587J8 LBH-204ENST00000406087 559 ntTSL 4 BASIC11.78□□□□□ -0.52
KHDC3LQ587J8 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC11.78□□□□□ -0.52
KHDC3LQ587J8 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC11.78□□□□□ -0.52
KHDC3LQ587J8 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC11.78□□□□□ -0.52
KHDC3LQ587J8 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC11.78□□□□□ -0.52
KHDC3LQ587J8 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC11.78□□□□□ -0.52
KHDC3LQ587J8 PRR29-209ENST00000582540 967 ntTSL 2 BASIC11.78□□□□□ -0.52
KHDC3LQ587J8 AC104692.2-201ENST00000603054 253 ntBASIC11.78□□□□□ -0.52
KHDC3LQ587J8 AC074044.1-201ENST00000609673 707 ntBASIC11.78□□□□□ -0.52
KHDC3LQ587J8 CITED2-204ENST00000618718 901 ntTSL 2 BASIC11.78□□□□□ -0.52
KHDC3LQ587J8 MIR6069-201ENST00000620069 79 ntBASIC11.78□□□□□ -0.52
KHDC3LQ587J8 GPR39-203ENST00000622084 900 ntTSL 5 BASIC11.78□□□□□ -0.52
KHDC3LQ587J8 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC11.78□□□□□ -0.52
KHDC3LQ587J8 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
KHDC3LQ587J8 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
KHDC3LQ587J8 CELSR1-201ENST00000262738 11389 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
KHDC3LQ587J8 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
KHDC3LQ587J8 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC11.78□□□□□ -0.52
KHDC3LQ587J8 PDGFRB-201ENST00000261799 5717 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
KHDC3LQ587J8 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC11.78□□□□□ -0.52
KHDC3LQ587J8 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
KHDC3LQ587J8 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
KHDC3LQ587J8 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
KHDC3LQ587J8 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
KHDC3LQ587J8 SLC46A1-208ENST00000618626 5363 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
KHDC3LQ587J8 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
KHDC3LQ587J8 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
KHDC3LQ587J8 TRIM26-267ENST00000453195 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
KHDC3LQ587J8 PI4KB-203ENST00000368874 3934 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
KHDC3LQ587J8 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
KHDC3LQ587J8 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms