Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SHROOM1Q2M3G4 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
SHROOM1Q2M3G4 AC215219.1-201ENST00000400706 1817 ntBASIC16.98■□□□□ 0.31
SHROOM1Q2M3G4 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC16.98■□□□□ 0.31
SHROOM1Q2M3G4 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC16.98■□□□□ 0.31
SHROOM1Q2M3G4 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SHROOM1Q2M3G4 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SHROOM1Q2M3G4 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SHROOM1Q2M3G4 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
SHROOM1Q2M3G4 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC16.98■□□□□ 0.31
SHROOM1Q2M3G4 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SHROOM1Q2M3G4 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SHROOM1Q2M3G4 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
SHROOM1Q2M3G4 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SHROOM1Q2M3G4 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SHROOM1Q2M3G4 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
SHROOM1Q2M3G4 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SHROOM1Q2M3G4 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
SHROOM1Q2M3G4 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SHROOM1Q2M3G4 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
SHROOM1Q2M3G4 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SHROOM1Q2M3G4 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
SHROOM1Q2M3G4 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SHROOM1Q2M3G4 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SHROOM1Q2M3G4 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SHROOM1Q2M3G4 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SHROOM1Q2M3G4 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
SHROOM1Q2M3G4 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC16.97■□□□□ 0.31
SHROOM1Q2M3G4 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SHROOM1Q2M3G4 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SHROOM1Q2M3G4 DNAJB1P1-201ENST00000429417 1024 ntBASIC16.97■□□□□ 0.31
SHROOM1Q2M3G4 AL627422.1-201ENST00000434104 580 ntBASIC16.97■□□□□ 0.31
SHROOM1Q2M3G4 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC16.97■□□□□ 0.31
SHROOM1Q2M3G4 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC16.97■□□□□ 0.31
SHROOM1Q2M3G4 AP002803.1-201ENST00000528836 498 ntBASIC16.97■□□□□ 0.31
SHROOM1Q2M3G4 NEU3-207ENST00000534628 746 ntTSL 2 BASIC16.97■□□□□ 0.31
SHROOM1Q2M3G4 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC16.97■□□□□ 0.31
SHROOM1Q2M3G4 AC027237.1-201ENST00000560942 655 ntBASIC16.97■□□□□ 0.31
SHROOM1Q2M3G4 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC16.97■□□□□ 0.31
SHROOM1Q2M3G4 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SHROOM1Q2M3G4 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SHROOM1Q2M3G4 BRD7P5-201ENST00000299197 1822 ntBASIC16.97■□□□□ 0.31
SHROOM1Q2M3G4 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SHROOM1Q2M3G4 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
SHROOM1Q2M3G4 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SHROOM1Q2M3G4 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
SHROOM1Q2M3G4 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
SHROOM1Q2M3G4 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
SHROOM1Q2M3G4 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SHROOM1Q2M3G4 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SHROOM1Q2M3G4 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SHROOM1Q2M3G4 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
SHROOM1Q2M3G4 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.97■□□□□ 0.31
SHROOM1Q2M3G4 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SHROOM1Q2M3G4 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
SHROOM1Q2M3G4 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
SHROOM1Q2M3G4 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC16.97■□□□□ 0.31
SHROOM1Q2M3G4 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SHROOM1Q2M3G4 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC16.96■□□□□ 0.31
SHROOM1Q2M3G4 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC16.96■□□□□ 0.31
SHROOM1Q2M3G4 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC16.96■□□□□ 0.31
SHROOM1Q2M3G4 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
SHROOM1Q2M3G4 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SHROOM1Q2M3G4 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
SHROOM1Q2M3G4 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SHROOM1Q2M3G4 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SHROOM1Q2M3G4 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC16.96■□□□□ 0.31
SHROOM1Q2M3G4 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
SHROOM1Q2M3G4 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.96■□□□□ 0.31
SHROOM1Q2M3G4 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SHROOM1Q2M3G4 FER1L4-210ENST00000615531 5998 ntBASIC16.96■□□□□ 0.31
SHROOM1Q2M3G4 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SHROOM1Q2M3G4 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC16.96■□□□□ 0.31
SHROOM1Q2M3G4 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC16.96■□□□□ 0.31
SHROOM1Q2M3G4 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SHROOM1Q2M3G4 RN7SL530P-201ENST00000485097 298 ntBASIC16.96■□□□□ 0.31
SHROOM1Q2M3G4 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC16.96■□□□□ 0.31
SHROOM1Q2M3G4 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC16.96■□□□□ 0.31
SHROOM1Q2M3G4 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC16.96■□□□□ 0.31
SHROOM1Q2M3G4 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
SHROOM1Q2M3G4 AC005618.3-201ENST00000624928 458 ntBASIC16.96■□□□□ 0.31
SHROOM1Q2M3G4 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
SHROOM1Q2M3G4 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SHROOM1Q2M3G4 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC16.96■□□□□ 0.31
SHROOM1Q2M3G4 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC16.96■□□□□ 0.31
SHROOM1Q2M3G4 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
SHROOM1Q2M3G4 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC16.96■□□□□ 0.31
SHROOM1Q2M3G4 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
SHROOM1Q2M3G4 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SHROOM1Q2M3G4 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
SHROOM1Q2M3G4 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
SHROOM1Q2M3G4 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
SHROOM1Q2M3G4 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
SHROOM1Q2M3G4 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
SHROOM1Q2M3G4 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC16.96■□□□□ 0.3
SHROOM1Q2M3G4 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
SHROOM1Q2M3G4 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
SHROOM1Q2M3G4 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
SHROOM1Q2M3G4 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC16.96■□□□□ 0.3
SHROOM1Q2M3G4 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms