Protein–RNA interactions for Protein: Q05901

CHRNB3, Neuronal acetylcholine receptor subunit beta-3, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB3Q05901 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
CHRNB3Q05901 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC14.01□□□□□ -0.17
CHRNB3Q05901 AC005562.1-201ENST00000583030 3219 ntBASIC14.01□□□□□ -0.17
CHRNB3Q05901 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CHRNB3Q05901 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
CHRNB3Q05901 AC023794.5-201ENST00000564380 2157 ntBASIC14.01□□□□□ -0.17
CHRNB3Q05901 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
CHRNB3Q05901 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CHRNB3Q05901 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC14.01□□□□□ -0.17
CHRNB3Q05901 CALY-203ENST00000368558 825 ntTSL 5 BASIC14.01□□□□□ -0.17
CHRNB3Q05901 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CHRNB3Q05901 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
CHRNB3Q05901 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC14.01□□□□□ -0.17
CHRNB3Q05901 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
CHRNB3Q05901 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC14.01□□□□□ -0.17
CHRNB3Q05901 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CHRNB3Q05901 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
CHRNB3Q05901 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CHRNB3Q05901 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC14.01□□□□□ -0.17
CHRNB3Q05901 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC14.01□□□□□ -0.17
CHRNB3Q05901 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC14.01□□□□□ -0.17
CHRNB3Q05901 AC190387.1-201ENST00000551683 408 ntBASIC14.01□□□□□ -0.17
CHRNB3Q05901 AC138761.1-201ENST00000584393 385 ntBASIC14.01□□□□□ -0.17
CHRNB3Q05901 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
CHRNB3Q05901 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC14.01□□□□□ -0.17
CHRNB3Q05901 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CHRNB3Q05901 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CHRNB3Q05901 CICP16-201ENST00000502609 2813 ntBASIC14.01□□□□□ -0.17
CHRNB3Q05901 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CHRNB3Q05901 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
CHRNB3Q05901 AC073548.1-201ENST00000624088 1882 ntBASIC14.01□□□□□ -0.17
CHRNB3Q05901 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CHRNB3Q05901 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CHRNB3Q05901 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
CHRNB3Q05901 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC14.01□□□□□ -0.17
CHRNB3Q05901 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CHRNB3Q05901 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CHRNB3Q05901 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CHRNB3Q05901 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC14□□□□□ -0.17
CHRNB3Q05901 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC14□□□□□ -0.17
CHRNB3Q05901 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC14□□□□□ -0.17
CHRNB3Q05901 AC011840.2-201ENST00000563063 1520 ntBASIC14□□□□□ -0.17
CHRNB3Q05901 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
CHRNB3Q05901 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC14□□□□□ -0.17
CHRNB3Q05901 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
CHRNB3Q05901 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC14□□□□□ -0.17
CHRNB3Q05901 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CHRNB3Q05901 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
CHRNB3Q05901 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC14□□□□□ -0.17
CHRNB3Q05901 KRT8P14-201ENST00000414254 1442 ntBASIC14□□□□□ -0.17
CHRNB3Q05901 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC14□□□□□ -0.17
CHRNB3Q05901 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CHRNB3Q05901 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC14□□□□□ -0.17
CHRNB3Q05901 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC14□□□□□ -0.17
CHRNB3Q05901 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC14□□□□□ -0.17
CHRNB3Q05901 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
CHRNB3Q05901 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CHRNB3Q05901 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CHRNB3Q05901 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
CHRNB3Q05901 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC14□□□□□ -0.17
CHRNB3Q05901 SUN1-204ENST00000403868 978 ntTSL 2 BASIC14□□□□□ -0.17
CHRNB3Q05901 RAD18-204ENST00000418463 563 ntTSL 4 BASIC14□□□□□ -0.17
CHRNB3Q05901 RAD18-205ENST00000421052 582 ntTSL 3 BASIC14□□□□□ -0.17
CHRNB3Q05901 FAM207CP-201ENST00000443486 507 ntBASIC14□□□□□ -0.17
CHRNB3Q05901 COX20P2-201ENST00000452636 358 ntBASIC14□□□□□ -0.17
CHRNB3Q05901 LHX6-205ENST00000464484 666 ntTSL 2 BASIC14□□□□□ -0.17
CHRNB3Q05901 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC14□□□□□ -0.17
CHRNB3Q05901 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC14□□□□□ -0.17
CHRNB3Q05901 LY6E-204ENST00000519546 971 ntTSL 2 BASIC14□□□□□ -0.17
CHRNB3Q05901 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
CHRNB3Q05901 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
CHRNB3Q05901 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
CHRNB3Q05901 RPS15-202ENST00000585665 467 ntTSL 3 BASIC14□□□□□ -0.17
CHRNB3Q05901 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC14□□□□□ -0.17
CHRNB3Q05901 AC004461.2-201ENST00000629517 803 ntBASIC14□□□□□ -0.17
CHRNB3Q05901 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC14□□□□□ -0.17
CHRNB3Q05901 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC14□□□□□ -0.17
CHRNB3Q05901 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
CHRNB3Q05901 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC14□□□□□ -0.17
CHRNB3Q05901 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CHRNB3Q05901 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
CHRNB3Q05901 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
CHRNB3Q05901 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC14□□□□□ -0.17
CHRNB3Q05901 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC14□□□□□ -0.17
CHRNB3Q05901 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CHRNB3Q05901 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
CHRNB3Q05901 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CHRNB3Q05901 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CHRNB3Q05901 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CHRNB3Q05901 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
CHRNB3Q05901 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
CHRNB3Q05901 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
CHRNB3Q05901 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC13.99□□□□□ -0.17
CHRNB3Q05901 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC13.99□□□□□ -0.17
CHRNB3Q05901 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CHRNB3Q05901 MBTD1-204ENST00000586178 5382 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
CHRNB3Q05901 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
CHRNB3Q05901 STRCP1-201ENST00000509801 5328 ntBASIC13.99□□□□□ -0.17
CHRNB3Q05901 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC13.99□□□□□ -0.17
CHRNB3Q05901 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms