Protein–RNA interactions for Protein: Q00610

CLTC, Clathrin heavy chain 1, humanhuman

Known RBP Predictions only

Length 1,675 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCQ00610 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CLTCQ00610 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC20.57■□□□□ 0.88
CLTCQ00610 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC20.57■□□□□ 0.88
CLTCQ00610 CHRNA1-205ENST00000409542 1460 ntTSL 3 BASIC20.57■□□□□ 0.88
CLTCQ00610 RPL10L-201ENST00000298283 812 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
CLTCQ00610 IL37-204ENST00000352179 709 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CLTCQ00610 AL158207.2-201ENST00000414926 266 ntTSL 5 BASIC20.57■□□□□ 0.88
CLTCQ00610 RN7SL524P-201ENST00000581152 300 ntBASIC20.57■□□□□ 0.88
CLTCQ00610 AL353622.2-201ENST00000605846 425 ntBASIC20.57■□□□□ 0.88
CLTCQ00610 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC20.57■□□□□ 0.88
CLTCQ00610 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CLTCQ00610 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CLTCQ00610 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC20.57■□□□□ 0.88
CLTCQ00610 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CLTCQ00610 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CLTCQ00610 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
CLTCQ00610 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLTCQ00610 AL162727.3-201ENST00000635661 2787 ntBASIC20.56■□□□□ 0.88
CLTCQ00610 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC20.56■□□□□ 0.88
CLTCQ00610 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLTCQ00610 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLTCQ00610 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC20.56■□□□□ 0.88
CLTCQ00610 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC20.56■□□□□ 0.88
CLTCQ00610 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CLTCQ00610 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CLTCQ00610 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLTCQ00610 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC20.56■□□□□ 0.88
CLTCQ00610 MIR611-201ENST00000384869 67 ntBASIC20.56■□□□□ 0.88
CLTCQ00610 LINC00399-201ENST00000439008 414 ntTSL 2 BASIC20.56■□□□□ 0.88
CLTCQ00610 AL445471.1-201ENST00000456316 820 ntTSL 5 BASIC20.56■□□□□ 0.88
CLTCQ00610 AC092910.2-201ENST00000491262 348 ntBASIC20.56■□□□□ 0.88
CLTCQ00610 AF274856.1-202ENST00000509345 871 ntTSL 4 BASIC20.56■□□□□ 0.88
CLTCQ00610 CSTP2-201ENST00000610599 398 ntBASIC20.56■□□□□ 0.88
CLTCQ00610 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLTCQ00610 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CLTCQ00610 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLTCQ00610 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
CLTCQ00610 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLTCQ00610 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.56■□□□□ 0.88
CLTCQ00610 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
CLTCQ00610 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLTCQ00610 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLTCQ00610 DUT-208ENST00000559540 1441 ntTSL 2 BASIC20.55■□□□□ 0.88
CLTCQ00610 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CLTCQ00610 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CLTCQ00610 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
CLTCQ00610 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC20.55■□□□□ 0.88
CLTCQ00610 POLR2G-201ENST00000301788 827 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CLTCQ00610 CALML6-201ENST00000307786 1101 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
CLTCQ00610 DHRS7C-201ENST00000330255 1006 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
CLTCQ00610 AC092810.2-201ENST00000431570 362 ntBASIC20.55■□□□□ 0.88
CLTCQ00610 AC078785.1-204ENST00000460707 764 ntTSL 3 BASIC20.55■□□□□ 0.88
CLTCQ00610 SNRPD2P2-201ENST00000473818 333 ntBASIC20.55■□□□□ 0.88
CLTCQ00610 CD44-224ENST00000526669 870 ntTSL 5 BASIC20.55■□□□□ 0.88
CLTCQ00610 KRT8P34-201ENST00000577607 1044 ntBASIC20.55■□□□□ 0.88
CLTCQ00610 RFX8-201ENST00000428343 1686 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
CLTCQ00610 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CLTCQ00610 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC20.55■□□□□ 0.88
CLTCQ00610 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC20.55■□□□□ 0.88
CLTCQ00610 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
CLTCQ00610 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC20.55■□□□□ 0.88
CLTCQ00610 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CLTCQ00610 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC20.55■□□□□ 0.88
CLTCQ00610 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CLTCQ00610 MYADML-201ENST00000474610 2147 ntBASIC20.55■□□□□ 0.88
CLTCQ00610 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC20.55■□□□□ 0.88
CLTCQ00610 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC20.55■□□□□ 0.88
CLTCQ00610 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
CLTCQ00610 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CLTCQ00610 AL161733.1-201ENST00000421067 462 ntTSL 3 BASIC20.54■□□□□ 0.88
CLTCQ00610 MOCS1-207ENST00000432280 1071 ntTSL 5 BASIC20.54■□□□□ 0.88
CLTCQ00610 RPSAP12-201ENST00000435879 888 ntBASIC20.54■□□□□ 0.88
CLTCQ00610 HNRNPA1P10-201ENST00000444945 962 ntBASIC20.54■□□□□ 0.88
CLTCQ00610 AC147876.1-201ENST00000504408 322 ntBASIC20.54■□□□□ 0.88
CLTCQ00610 HNRNPA1P56-201ENST00000505767 954 ntBASIC20.54■□□□□ 0.88
CLTCQ00610 C1orf198-207ENST00000523410 1041 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
CLTCQ00610 URB1-AS1-201ENST00000534991 831 ntBASIC20.54■□□□□ 0.88
CLTCQ00610 SLC25A3-215ENST00000551265 580 ntTSL 4 BASIC20.54■□□□□ 0.88
CLTCQ00610 AL031705.1-201ENST00000566922 682 ntTSL 3 BASIC20.54■□□□□ 0.88
CLTCQ00610 ZFP1-207ENST00000567481 493 ntTSL 4 BASIC20.54■□□□□ 0.88
CLTCQ00610 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLTCQ00610 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
CLTCQ00610 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLTCQ00610 GFI1B-203ENST00000372123 1514 ntTSL 5 BASIC20.54■□□□□ 0.88
CLTCQ00610 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.54■□□□□ 0.88
CLTCQ00610 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLTCQ00610 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC20.54■□□□□ 0.88
CLTCQ00610 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CLTCQ00610 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CLTCQ00610 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CLTCQ00610 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLTCQ00610 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLTCQ00610 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
CLTCQ00610 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CLTCQ00610 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CLTCQ00610 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLTCQ00610 CCL25-202ENST00000315626 450 ntTSL 2 BASIC20.54■□□□□ 0.88
CLTCQ00610 HCRTR1-201ENST00000373705 1170 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CLTCQ00610 IFNA2-201ENST00000380206 1135 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
CLTCQ00610 VPREB1-202ENST00000403807 755 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms