Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
CDK3Q00526 Z97180.1-201ENST00000445173 988 ntBASIC14.4□□□□□ -0.1
CDK3Q00526 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC14.4□□□□□ -0.1
CDK3Q00526 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDK3Q00526 TSACC-208ENST00000481479 741 ntTSL 2 BASIC14.4□□□□□ -0.1
CDK3Q00526 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC14.4□□□□□ -0.1
CDK3Q00526 CCNC-217ENST00000523985 958 ntTSL 2 BASIC14.4□□□□□ -0.1
CDK3Q00526 AC003686.1-201ENST00000550956 1034 ntBASIC14.4□□□□□ -0.1
CDK3Q00526 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC14.4□□□□□ -0.1
CDK3Q00526 SORD2P-201ENST00000558556 1069 ntBASIC14.4□□□□□ -0.1
CDK3Q00526 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CDK3Q00526 MIR3619-201ENST00000579667 83 ntBASIC14.4□□□□□ -0.1
CDK3Q00526 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
CDK3Q00526 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
CDK3Q00526 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
CDK3Q00526 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC14.4□□□□□ -0.1
CDK3Q00526 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CDK3Q00526 AL157813.1-201ENST00000612996 587 ntBASIC14.4□□□□□ -0.1
CDK3Q00526 AL021578.1-201ENST00000613646 709 ntBASIC14.4□□□□□ -0.1
CDK3Q00526 AC092299.1-201ENST00000632679 757 ntBASIC14.4□□□□□ -0.1
CDK3Q00526 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC14.4□□□□□ -0.1
CDK3Q00526 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDK3Q00526 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC14.4□□□□□ -0.1
CDK3Q00526 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDK3Q00526 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDK3Q00526 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CDK3Q00526 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDK3Q00526 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDK3Q00526 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CDK3Q00526 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDK3Q00526 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CDK3Q00526 AHCYP4-201ENST00000419201 1315 ntBASIC14.4□□□□□ -0.1
CDK3Q00526 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC14.39□□□□□ -0.11
CDK3Q00526 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
CDK3Q00526 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDK3Q00526 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDK3Q00526 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDK3Q00526 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
CDK3Q00526 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDK3Q00526 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDK3Q00526 AC113367.3-201ENST00000508316 1912 ntBASIC14.39□□□□□ -0.11
CDK3Q00526 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC14.39□□□□□ -0.11
CDK3Q00526 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC14.39□□□□□ -0.11
CDK3Q00526 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDK3Q00526 AC215219.1-201ENST00000400706 1817 ntBASIC14.39□□□□□ -0.11
CDK3Q00526 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
CDK3Q00526 INTS4P1-203ENST00000641008 3683 ntBASIC14.39□□□□□ -0.11
CDK3Q00526 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC14.39□□□□□ -0.11
CDK3Q00526 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CDK3Q00526 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CDK3Q00526 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDK3Q00526 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDK3Q00526 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDK3Q00526 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC14.39□□□□□ -0.11
CDK3Q00526 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CDK3Q00526 AL662890.1-201ENST00000396818 632 ntBASIC14.39□□□□□ -0.11
CDK3Q00526 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDK3Q00526 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC14.39□□□□□ -0.11
CDK3Q00526 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC14.39□□□□□ -0.11
CDK3Q00526 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC14.39□□□□□ -0.11
CDK3Q00526 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC14.39□□□□□ -0.11
CDK3Q00526 ST13P19-201ENST00000442505 1124 ntBASIC14.39□□□□□ -0.11
CDK3Q00526 AL596276.2-201ENST00000447525 331 ntBASIC14.39□□□□□ -0.11
CDK3Q00526 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CDK3Q00526 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CDK3Q00526 AC024681.1-201ENST00000521917 487 ntBASIC14.39□□□□□ -0.11
CDK3Q00526 AC090857.1-201ENST00000527400 390 ntBASIC14.39□□□□□ -0.11
CDK3Q00526 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
CDK3Q00526 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC14.39□□□□□ -0.11
CDK3Q00526 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC14.39□□□□□ -0.11
CDK3Q00526 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC14.39□□□□□ -0.11
CDK3Q00526 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC14.39□□□□□ -0.11
CDK3Q00526 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
CDK3Q00526 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC14.39□□□□□ -0.11
CDK3Q00526 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CDK3Q00526 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC14.39□□□□□ -0.11
CDK3Q00526 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDK3Q00526 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDK3Q00526 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
CDK3Q00526 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CDK3Q00526 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDK3Q00526 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
CDK3Q00526 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC14.39□□□□□ -0.11
CDK3Q00526 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC14.39□□□□□ -0.11
CDK3Q00526 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
CDK3Q00526 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDK3Q00526 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDK3Q00526 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CDK3Q00526 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDK3Q00526 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CDK3Q00526 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CDK3Q00526 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CDK3Q00526 KRT8P21-201ENST00000430398 1491 ntBASIC14.38□□□□□ -0.11
CDK3Q00526 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDK3Q00526 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDK3Q00526 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC14.38□□□□□ -0.11
CDK3Q00526 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDK3Q00526 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC14.38□□□□□ -0.11
CDK3Q00526 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDK3Q00526 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms