Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 AC010141.1-201ENST00000411585 623 ntBASIC12.86□□□□□ -0.35
HIST1H3AP68431 PTPA-215ENST00000432124 567 ntTSL 4 BASIC12.86□□□□□ -0.35
HIST1H3AP68431 RPL7P3-201ENST00000441388 714 ntBASIC12.86□□□□□ -0.35
HIST1H3AP68431 AL035414.1-201ENST00000451327 857 ntBASIC12.86□□□□□ -0.35
HIST1H3AP68431 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
HIST1H3AP68431 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
HIST1H3AP68431 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC12.86□□□□□ -0.35
HIST1H3AP68431 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
HIST1H3AP68431 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC12.86□□□□□ -0.35
HIST1H3AP68431 AHRR-211ENST00000515206 462 ntTSL 5 BASIC12.86□□□□□ -0.35
HIST1H3AP68431 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC12.86□□□□□ -0.35
HIST1H3AP68431 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
HIST1H3AP68431 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
HIST1H3AP68431 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC12.86□□□□□ -0.35
HIST1H3AP68431 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC12.86□□□□□ -0.35
HIST1H3AP68431 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC12.86□□□□□ -0.35
HIST1H3AP68431 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC12.86□□□□□ -0.35
HIST1H3AP68431 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC12.86□□□□□ -0.35
HIST1H3AP68431 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC12.86□□□□□ -0.35
HIST1H3AP68431 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
HIST1H3AP68431 AC012617.1-204ENST00000586340 2305 ntBASIC12.86□□□□□ -0.35
HIST1H3AP68431 UCKL1-AS1-201ENST00000623569 3602 ntBASIC12.86□□□□□ -0.35
HIST1H3AP68431 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
HIST1H3AP68431 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
HIST1H3AP68431 AL354989.2-201ENST00000435838 1540 ntBASIC12.86□□□□□ -0.35
HIST1H3AP68431 CNTNAP3P2-201ENST00000617175 3861 ntBASIC12.86□□□□□ -0.35
HIST1H3AP68431 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
HIST1H3AP68431 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
HIST1H3AP68431 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
HIST1H3AP68431 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
HIST1H3AP68431 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
HIST1H3AP68431 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
HIST1H3AP68431 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
HIST1H3AP68431 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC12.86□□□□□ -0.35
HIST1H3AP68431 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
HIST1H3AP68431 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
HIST1H3AP68431 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
HIST1H3AP68431 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
HIST1H3AP68431 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC12.85□□□□□ -0.35
HIST1H3AP68431 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
HIST1H3AP68431 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
HIST1H3AP68431 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
HIST1H3AP68431 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
HIST1H3AP68431 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
HIST1H3AP68431 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
HIST1H3AP68431 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
HIST1H3AP68431 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC12.85□□□□□ -0.35
HIST1H3AP68431 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC12.85□□□□□ -0.35
HIST1H3AP68431 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
HIST1H3AP68431 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
HIST1H3AP68431 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
HIST1H3AP68431 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
HIST1H3AP68431 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
HIST1H3AP68431 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
HIST1H3AP68431 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
HIST1H3AP68431 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC12.85□□□□□ -0.35
HIST1H3AP68431 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
HIST1H3AP68431 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
HIST1H3AP68431 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
HIST1H3AP68431 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
HIST1H3AP68431 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
HIST1H3AP68431 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
HIST1H3AP68431 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
HIST1H3AP68431 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
HIST1H3AP68431 MIR1202-201ENST00000408529 83 ntBASIC12.85□□□□□ -0.35
HIST1H3AP68431 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC12.85□□□□□ -0.35
HIST1H3AP68431 KRT17P7-201ENST00000451704 1104 ntBASIC12.85□□□□□ -0.35
HIST1H3AP68431 CICP12-201ENST00000455801 843 ntBASIC12.85□□□□□ -0.35
HIST1H3AP68431 PFN2-215ENST00000497148 743 ntTSL 4 BASIC12.85□□□□□ -0.35
HIST1H3AP68431 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC12.85□□□□□ -0.35
HIST1H3AP68431 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC12.85□□□□□ -0.35
HIST1H3AP68431 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
HIST1H3AP68431 AC027237.1-201ENST00000560942 655 ntBASIC12.85□□□□□ -0.35
HIST1H3AP68431 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC12.85□□□□□ -0.35
HIST1H3AP68431 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
HIST1H3AP68431 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
HIST1H3AP68431 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC12.85□□□□□ -0.35
HIST1H3AP68431 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC12.85□□□□□ -0.35
HIST1H3AP68431 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
HIST1H3AP68431 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC12.85□□□□□ -0.35
HIST1H3AP68431 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
HIST1H3AP68431 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
HIST1H3AP68431 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
HIST1H3AP68431 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
HIST1H3AP68431 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
HIST1H3AP68431 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC12.85□□□□□ -0.35
HIST1H3AP68431 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
HIST1H3AP68431 AC015656.1-201ENST00000624209 3578 ntBASIC12.85□□□□□ -0.35
HIST1H3AP68431 AHCYP2-201ENST00000430630 1300 ntBASIC12.85□□□□□ -0.35
HIST1H3AP68431 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
HIST1H3AP68431 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
HIST1H3AP68431 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
HIST1H3AP68431 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
HIST1H3AP68431 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
HIST1H3AP68431 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
HIST1H3AP68431 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
HIST1H3AP68431 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC12.85□□□□□ -0.35
HIST1H3AP68431 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
HIST1H3AP68431 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
HIST1H3AP68431 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms