Protein–RNA interactions for Protein: P68133

ACTA1, Actin, alpha skeletal muscle, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTA1P68133 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
ACTA1P68133 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ACTA1P68133 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
ACTA1P68133 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ACTA1P68133 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
ACTA1P68133 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
ACTA1P68133 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ACTA1P68133 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ACTA1P68133 CROT-203ENST00000419147 2959 ntTSL 2 BASIC13.16□□□□□ -0.3
ACTA1P68133 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
ACTA1P68133 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC13.16□□□□□ -0.3
ACTA1P68133 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC13.16□□□□□ -0.3
ACTA1P68133 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ACTA1P68133 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
ACTA1P68133 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC13.16□□□□□ -0.3
ACTA1P68133 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
ACTA1P68133 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC13.16□□□□□ -0.3
ACTA1P68133 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ACTA1P68133 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ACTA1P68133 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC13.16□□□□□ -0.3
ACTA1P68133 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
ACTA1P68133 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
ACTA1P68133 AL589987.1-201ENST00000453380 819 ntBASIC13.16□□□□□ -0.3
ACTA1P68133 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
ACTA1P68133 AC135586.1-201ENST00000539323 574 ntBASIC13.16□□□□□ -0.3
ACTA1P68133 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC13.16□□□□□ -0.3
ACTA1P68133 VPS18-202ENST00000558474 873 ntTSL 3 BASIC13.16□□□□□ -0.3
ACTA1P68133 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ACTA1P68133 AC120045.2-201ENST00000567334 178 ntBASIC13.16□□□□□ -0.3
ACTA1P68133 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC13.16□□□□□ -0.3
ACTA1P68133 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC13.16□□□□□ -0.3
ACTA1P68133 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC13.16□□□□□ -0.3
ACTA1P68133 BRI3BPP1-201ENST00000594224 787 ntBASIC13.16□□□□□ -0.3
ACTA1P68133 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC13.16□□□□□ -0.3
ACTA1P68133 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC13.16□□□□□ -0.3
ACTA1P68133 LRRC59-203ENST00000576448 1531 ntBASIC13.16□□□□□ -0.3
ACTA1P68133 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC13.16□□□□□ -0.3
ACTA1P68133 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC13.16□□□□□ -0.3
ACTA1P68133 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC13.16□□□□□ -0.3
ACTA1P68133 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ACTA1P68133 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ACTA1P68133 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
ACTA1P68133 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ACTA1P68133 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ACTA1P68133 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
ACTA1P68133 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC13.16□□□□□ -0.3
ACTA1P68133 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC13.16□□□□□ -0.3
ACTA1P68133 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
ACTA1P68133 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ACTA1P68133 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC13.16□□□□□ -0.3
ACTA1P68133 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
ACTA1P68133 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
ACTA1P68133 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
ACTA1P68133 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC13.15□□□□□ -0.3
ACTA1P68133 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ACTA1P68133 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
ACTA1P68133 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC13.15□□□□□ -0.3
ACTA1P68133 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ACTA1P68133 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ACTA1P68133 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
ACTA1P68133 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
ACTA1P68133 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
ACTA1P68133 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
ACTA1P68133 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ACTA1P68133 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
ACTA1P68133 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ACTA1P68133 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ACTA1P68133 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
ACTA1P68133 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
ACTA1P68133 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ACTA1P68133 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ACTA1P68133 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC13.15□□□□□ -0.3
ACTA1P68133 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC13.15□□□□□ -0.3
ACTA1P68133 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ACTA1P68133 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ACTA1P68133 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ACTA1P68133 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
ACTA1P68133 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC13.15□□□□□ -0.3
ACTA1P68133 MEP1AP4-201ENST00000423244 1087 ntBASIC13.15□□□□□ -0.3
ACTA1P68133 AC134915.1-201ENST00000426461 574 ntBASIC13.15□□□□□ -0.3
ACTA1P68133 RASL12-203ENST00000434605 982 ntTSL 2 BASIC13.15□□□□□ -0.3
ACTA1P68133 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC13.15□□□□□ -0.3
ACTA1P68133 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
ACTA1P68133 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC13.15□□□□□ -0.3
ACTA1P68133 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC13.15□□□□□ -0.3
ACTA1P68133 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC13.15□□□□□ -0.3
ACTA1P68133 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
ACTA1P68133 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
ACTA1P68133 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
ACTA1P68133 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
ACTA1P68133 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ACTA1P68133 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ACTA1P68133 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC13.15□□□□□ -0.3
ACTA1P68133 PID1-202ENST00000392054 2745 ntTSL 2 BASIC13.15□□□□□ -0.3
ACTA1P68133 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
ACTA1P68133 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
ACTA1P68133 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.3
ACTA1P68133 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
ACTA1P68133 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
ACTA1P68133 PPT1-213ENST00000641319 2388 ntBASIC13.15□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms