Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
SEC61A1P61619 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SEC61A1P61619 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
SEC61A1P61619 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC12.99□□□□□ -0.33
SEC61A1P61619 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SEC61A1P61619 AC118758.2-201ENST00000614242 2813 ntBASIC12.99□□□□□ -0.33
SEC61A1P61619 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
SEC61A1P61619 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
SEC61A1P61619 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
SEC61A1P61619 AMT-232ENST00000636199 1546 ntTSL 5 BASIC12.99□□□□□ -0.33
SEC61A1P61619 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SEC61A1P61619 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
SEC61A1P61619 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
SEC61A1P61619 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SEC61A1P61619 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SEC61A1P61619 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC12.99□□□□□ -0.33
SEC61A1P61619 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
SEC61A1P61619 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SEC61A1P61619 AC015909.5-201ENST00000624336 2266 ntBASIC12.99□□□□□ -0.33
SEC61A1P61619 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
SEC61A1P61619 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
SEC61A1P61619 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
SEC61A1P61619 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
SEC61A1P61619 INVS-201ENST00000262456 2968 ntTSL 5 BASIC12.99□□□□□ -0.33
SEC61A1P61619 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
SEC61A1P61619 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SEC61A1P61619 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
SEC61A1P61619 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
SEC61A1P61619 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SEC61A1P61619 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SEC61A1P61619 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC12.99□□□□□ -0.33
SEC61A1P61619 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC12.99□□□□□ -0.33
SEC61A1P61619 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC12.99□□□□□ -0.33
SEC61A1P61619 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC12.99□□□□□ -0.33
SEC61A1P61619 VDAC1P7-201ENST00000462417 847 ntBASIC12.99□□□□□ -0.33
SEC61A1P61619 KRT18P43-201ENST00000469825 1281 ntBASIC12.99□□□□□ -0.33
SEC61A1P61619 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC12.99□□□□□ -0.33
SEC61A1P61619 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
SEC61A1P61619 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC12.99□□□□□ -0.33
SEC61A1P61619 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC12.99□□□□□ -0.33
SEC61A1P61619 BRI3BPP1-201ENST00000594224 787 ntBASIC12.99□□□□□ -0.33
SEC61A1P61619 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC12.99□□□□□ -0.33
SEC61A1P61619 AL049840.4-201ENST00000602422 811 ntBASIC12.99□□□□□ -0.33
SEC61A1P61619 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC12.99□□□□□ -0.33
SEC61A1P61619 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC12.99□□□□□ -0.33
SEC61A1P61619 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
SEC61A1P61619 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC12.99□□□□□ -0.33
SEC61A1P61619 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
SEC61A1P61619 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC12.99□□□□□ -0.33
SEC61A1P61619 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
SEC61A1P61619 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
SEC61A1P61619 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SEC61A1P61619 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SEC61A1P61619 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
SEC61A1P61619 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
SEC61A1P61619 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SEC61A1P61619 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SEC61A1P61619 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC12.99□□□□□ -0.33
SEC61A1P61619 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
SEC61A1P61619 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC12.98□□□□□ -0.33
SEC61A1P61619 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC12.98□□□□□ -0.33
SEC61A1P61619 USP4-203ENST00000415188 1454 ntTSL 3 BASIC12.98□□□□□ -0.33
SEC61A1P61619 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC12.98□□□□□ -0.33
SEC61A1P61619 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC12.98□□□□□ -0.33
SEC61A1P61619 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SEC61A1P61619 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
SEC61A1P61619 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
SEC61A1P61619 AC130686.1-201ENST00000622936 2466 ntBASIC12.98□□□□□ -0.33
SEC61A1P61619 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SEC61A1P61619 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC12.98□□□□□ -0.33
SEC61A1P61619 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SEC61A1P61619 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SEC61A1P61619 FUK-202ENST00000378912 3925 ntTSL 2 BASIC12.98□□□□□ -0.33
SEC61A1P61619 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
SEC61A1P61619 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
SEC61A1P61619 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SEC61A1P61619 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
SEC61A1P61619 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SEC61A1P61619 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SEC61A1P61619 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SEC61A1P61619 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
SEC61A1P61619 AL442647.2-201ENST00000429864 857 ntBASIC12.98□□□□□ -0.33
SEC61A1P61619 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SEC61A1P61619 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SEC61A1P61619 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC12.98□□□□□ -0.33
SEC61A1P61619 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC12.98□□□□□ -0.33
SEC61A1P61619 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC12.98□□□□□ -0.33
SEC61A1P61619 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC12.98□□□□□ -0.33
SEC61A1P61619 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SEC61A1P61619 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC12.98□□□□□ -0.33
SEC61A1P61619 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC12.98□□□□□ -0.33
SEC61A1P61619 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC12.98□□□□□ -0.33
SEC61A1P61619 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC12.98□□□□□ -0.33
SEC61A1P61619 GPX4-206ENST00000588919 803 ntTSL 2 BASIC12.98□□□□□ -0.33
SEC61A1P61619 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
SEC61A1P61619 AC010319.3-201ENST00000597028 470 ntBASIC12.98□□□□□ -0.33
SEC61A1P61619 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC12.98□□□□□ -0.33
SEC61A1P61619 RPSAP52-203ENST00000622976 1023 ntBASIC12.98□□□□□ -0.33
SEC61A1P61619 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SEC61A1P61619 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC12.98□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms