Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC13.51□□□□□ -0.25
CDC42P60953 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
CDC42P60953 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CDC42P60953 HPD-204ENST00000543163 1709 ntTSL 5 BASIC13.51□□□□□ -0.25
CDC42P60953 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
CDC42P60953 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC13.51□□□□□ -0.25
CDC42P60953 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
CDC42P60953 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
CDC42P60953 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CDC42P60953 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CDC42P60953 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CDC42P60953 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
CDC42P60953 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CDC42P60953 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
CDC42P60953 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC13.51□□□□□ -0.25
CDC42P60953 TLE1P1-201ENST00000422965 589 ntBASIC13.51□□□□□ -0.25
CDC42P60953 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC13.51□□□□□ -0.25
CDC42P60953 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CDC42P60953 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC13.51□□□□□ -0.25
CDC42P60953 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC13.51□□□□□ -0.25
CDC42P60953 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC13.51□□□□□ -0.25
CDC42P60953 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC13.51□□□□□ -0.25
CDC42P60953 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC13.51□□□□□ -0.25
CDC42P60953 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC13.51□□□□□ -0.25
CDC42P60953 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
CDC42P60953 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
CDC42P60953 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC13.51□□□□□ -0.25
CDC42P60953 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
CDC42P60953 PEAR1-202ENST00000338302 4970 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
CDC42P60953 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC13.51□□□□□ -0.25
CDC42P60953 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CDC42P60953 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CDC42P60953 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CDC42P60953 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CDC42P60953 AC004899.2-201ENST00000622993 3860 ntBASIC13.51□□□□□ -0.25
CDC42P60953 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
CDC42P60953 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CDC42P60953 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
CDC42P60953 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CDC42P60953 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC13.51□□□□□ -0.25
CDC42P60953 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CDC42P60953 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CDC42P60953 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC13.5□□□□□ -0.25
CDC42P60953 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CDC42P60953 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC13.5□□□□□ -0.25
CDC42P60953 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC13.5□□□□□ -0.25
CDC42P60953 PDGFRB-201ENST00000261799 5717 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CDC42P60953 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CDC42P60953 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC13.5□□□□□ -0.25
CDC42P60953 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CDC42P60953 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CDC42P60953 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
CDC42P60953 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CDC42P60953 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CDC42P60953 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CDC42P60953 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
CDC42P60953 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CDC42P60953 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
CDC42P60953 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC13.5□□□□□ -0.25
CDC42P60953 ABCB8-202ENST00000358849 4683 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CDC42P60953 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CDC42P60953 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC13.5□□□□□ -0.25
CDC42P60953 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CDC42P60953 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC13.5□□□□□ -0.25
CDC42P60953 AC007969.1-201ENST00000433675 447 ntBASIC13.5□□□□□ -0.25
CDC42P60953 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC13.5□□□□□ -0.25
CDC42P60953 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
CDC42P60953 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC13.5□□□□□ -0.25
CDC42P60953 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CDC42P60953 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
CDC42P60953 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC13.5□□□□□ -0.25
CDC42P60953 COQ4-205ENST00000609948 956 ntTSL 2 BASIC13.5□□□□□ -0.25
CDC42P60953 5S_rRNA.22-201ENST00000614916 106 ntBASIC13.5□□□□□ -0.25
CDC42P60953 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
CDC42P60953 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CDC42P60953 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
CDC42P60953 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC13.5□□□□□ -0.25
CDC42P60953 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CDC42P60953 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC13.5□□□□□ -0.25
CDC42P60953 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC13.5□□□□□ -0.25
CDC42P60953 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CDC42P60953 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
CDC42P60953 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CDC42P60953 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CDC42P60953 DLGAP1-205ENST00000400150 5332 ntTSL 5 BASIC13.5□□□□□ -0.25
CDC42P60953 MIR497HG-202ENST00000572453 3838 ntBASIC13.5□□□□□ -0.25
CDC42P60953 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CDC42P60953 AC020658.7-201ENST00000624274 2442 ntBASIC13.5□□□□□ -0.25
CDC42P60953 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CDC42P60953 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC13.5□□□□□ -0.25
CDC42P60953 AC015688.4-201ENST00000580780 1647 ntBASIC13.5□□□□□ -0.25
CDC42P60953 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CDC42P60953 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC13.49□□□□□ -0.25
CDC42P60953 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC13.49□□□□□ -0.25
CDC42P60953 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CDC42P60953 BCL2L11-221ENST00000621302 5224 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
CDC42P60953 BCL2L11-222ENST00000622509 5231 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
CDC42P60953 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CDC42P60953 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CDC42P60953 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms