Protein–RNA interactions for Protein: P58511

SMIM11A, Small integral membrane protein 11A, humanhuman

Predictions only

Length 58 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11AP58511 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC13.61□□□□□ -0.23
SMIM11AP58511 EIF3FP3-201ENST00000434851 1086 ntBASIC13.61□□□□□ -0.23
SMIM11AP58511 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC13.61□□□□□ -0.23
SMIM11AP58511 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SMIM11AP58511 GCOM2-201ENST00000509133 1104 ntBASIC13.61□□□□□ -0.23
SMIM11AP58511 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC13.61□□□□□ -0.23
SMIM11AP58511 AC104794.3-201ENST00000566840 1248 ntBASIC13.61□□□□□ -0.23
SMIM11AP58511 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SMIM11AP58511 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC13.61□□□□□ -0.23
SMIM11AP58511 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC13.61□□□□□ -0.23
SMIM11AP58511 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
SMIM11AP58511 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
SMIM11AP58511 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
SMIM11AP58511 FP325330.2-201ENST00000624219 5630 ntBASIC13.61□□□□□ -0.23
SMIM11AP58511 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SMIM11AP58511 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
SMIM11AP58511 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SMIM11AP58511 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC13.61□□□□□ -0.23
SMIM11AP58511 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
SMIM11AP58511 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SMIM11AP58511 SLC46A1-208ENST00000618626 5363 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SMIM11AP58511 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
SMIM11AP58511 AGER-206ENST00000375070 1463 ntTSL 5 BASIC13.61□□□□□ -0.23
SMIM11AP58511 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SMIM11AP58511 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC13.61□□□□□ -0.23
SMIM11AP58511 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SMIM11AP58511 RSBN1L-201ENST00000334955 6422 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
SMIM11AP58511 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SMIM11AP58511 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SMIM11AP58511 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC13.6□□□□□ -0.23
SMIM11AP58511 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SMIM11AP58511 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SMIM11AP58511 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC13.6□□□□□ -0.23
SMIM11AP58511 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SMIM11AP58511 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
SMIM11AP58511 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SMIM11AP58511 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SMIM11AP58511 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
SMIM11AP58511 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SMIM11AP58511 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SMIM11AP58511 MBTD1-204ENST00000586178 5382 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
SMIM11AP58511 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SMIM11AP58511 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
SMIM11AP58511 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SMIM11AP58511 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC13.6□□□□□ -0.23
SMIM11AP58511 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SMIM11AP58511 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SMIM11AP58511 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SMIM11AP58511 METTL26-204ENST00000397665 558 ntTSL 2 BASIC13.6□□□□□ -0.23
SMIM11AP58511 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC13.6□□□□□ -0.23
SMIM11AP58511 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC13.6□□□□□ -0.23
SMIM11AP58511 AC004890.2-204ENST00000481968 304 ntBASIC13.6□□□□□ -0.23
SMIM11AP58511 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC13.6□□□□□ -0.23
SMIM11AP58511 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SMIM11AP58511 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SMIM11AP58511 FOS-202ENST00000535987 1402 ntTSL 2 BASIC13.6□□□□□ -0.23
SMIM11AP58511 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC13.6□□□□□ -0.23
SMIM11AP58511 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SMIM11AP58511 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC13.6□□□□□ -0.23
SMIM11AP58511 CETP-203ENST00000566128 1733 ntTSL 5 BASIC13.6□□□□□ -0.23
SMIM11AP58511 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC13.6□□□□□ -0.23
SMIM11AP58511 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC13.6□□□□□ -0.23
SMIM11AP58511 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
SMIM11AP58511 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC13.6□□□□□ -0.23
SMIM11AP58511 AC099568.2-201ENST00000609194 695 ntBASIC13.6□□□□□ -0.23
SMIM11AP58511 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC13.6□□□□□ -0.23
SMIM11AP58511 AL390754.1-201ENST00000619088 582 ntBASIC13.6□□□□□ -0.23
SMIM11AP58511 AC093028.1-201ENST00000622998 982 ntBASIC13.6□□□□□ -0.23
SMIM11AP58511 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
SMIM11AP58511 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC13.6□□□□□ -0.23
SMIM11AP58511 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SMIM11AP58511 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
SMIM11AP58511 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
SMIM11AP58511 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
SMIM11AP58511 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC13.6□□□□□ -0.23
SMIM11AP58511 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
SMIM11AP58511 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
SMIM11AP58511 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
SMIM11AP58511 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC13.6□□□□□ -0.23
SMIM11AP58511 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SMIM11AP58511 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC13.6□□□□□ -0.23
SMIM11AP58511 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SMIM11AP58511 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC13.6□□□□□ -0.23
SMIM11AP58511 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC13.6□□□□□ -0.23
SMIM11AP58511 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC13.59□□□□□ -0.23
SMIM11AP58511 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
SMIM11AP58511 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
SMIM11AP58511 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SMIM11AP58511 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SMIM11AP58511 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
SMIM11AP58511 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SMIM11AP58511 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC13.59□□□□□ -0.23
SMIM11AP58511 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
SMIM11AP58511 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC13.59□□□□□ -0.23
SMIM11AP58511 AC090643.2-201ENST00000623442 2029 ntBASIC13.59□□□□□ -0.23
SMIM11AP58511 SUCO-202ENST00000367723 5916 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SMIM11AP58511 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SMIM11AP58511 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC13.59□□□□□ -0.23
SMIM11AP58511 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SMIM11AP58511 APP-205ENST00000358918 2366 ntTSL 5 BASIC13.59□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms